Strain | Pseudomonas putida S12, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTAAAGCTCATCGGTCCACAGCACCGGCATCGTCGAGCTGTGGCTCAGGTTCGCCGCCGGGTCCTGCTTGTAGAAGTCGTCGCGCTGGTAGCGCTCGATC CACTCACTTGGGTAGTTGCTATAGAGGTACAGCCTTGGCGTTTGCGTAGCGATCTGAATGCGGATGTTCAGCCCAAGGTAATCCATGTCCAGGTCCTGAG CCAGATGGACTGCAATGTCGAATAGCTTCTGCGGGCTGCGTTCGCTGACGAACGCCTGAAGATACTCGGGTTTCCAGTGAAGCATCTGAAACACTCCTTC GGGTGCACAGGATCCAATCCGTTTGAGTACCCGGATGATTGTAGGAAAAGACCTACCATCCTGTTGGGATTTTTTTGTTATAGCGAACAGGATTTTCTGC GAGTTCGGCACGTTCATCCTGGATGAGGCCCTACAAAGCGGTGGTTTTTATCCTGGCCACTTTAGGCGACACTGTGCACACGCCAACCCTGGAGCCCGAT
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DNA Sequence for Gene |
>RPPX_RS13820
ATGACCGCTAGCGCCGAAAAGTTCACTCGCCAGACACTGCTTGATGTTCAGCCACTGACGCCGAACCTCTTCAGCCTGCGGGTTACGCGCGATGCGGGGT TCCGCTTCCGTTCCGGCCAATTCGCCCGGCTAGGTGTGACCAAGGCCGATGGTAGTGTGGTGTGGCGCGCCTATTCCATGGTCAGCGCCCCCCATGACGA GCACCTGGATTTCTTTTCCATCGTGGTGCCAGGTGGTGAGTTCACCAGTGAGCTGAGCCGTTTGGGTGCAGGCGATACGTTGCTGATCGACCGCCAGGCG TTCGGTTTTCTCACCCTCGACCGCTTCGTCGGAGGTCGTGACCTGTGGCTGCTGGCTACCGGTACCGGCATTGCGCCATTTATGTCGATCCTGCAGGACT TCGAGGCCTGGGAGCGCTTTGACAGCATCAAGCTGGTGTATTCAGTGCGCGAAGCGAAGGAGCTGGCCTATGTGGATGAAATTGCCGGCCTGGAACAGCG CGATTACCTGGCCGAGTACGCGGGCAAGTTGCAGTTCATTCCCGTGGTGACCCGTGAACAGCACCCCGGGGCCTTGAATCAGCGCATTACCACGTTGATC GAGAATGGCGAGCTGGAGAAGGCGGCAGGGCTTGAACTGTCGCCGGAGCATTCGCGGGTGATGCTGTGCGGTAACCCGGAAATGATCGACGAAACCCGCA AGGTCCTCAAGGCGCGAGACCTGCAACTGAGCCTGAGCAAGCGGCCCGGGCAGGTGGCTGTCGAGAACTACTGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GACAATTGCGGCCGTTGTGGGCCTGTAGGCGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCGCCA CCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAACA CCGGCAGAGCCGGTGCCATCCACCGCACTGGATTCTTCGCCAGCATGCCCGCTCCTACAGCGCCCCCGGCAATTTCAAGGCAAGCGATTCTGGTTCTGCG TCTTGAGCAAATCGCGGATTTCGGTCAGCAGCGTCTCTTCAGCCGAAGGCACAGGCGGCGTAGTCGGTGCCACGGCTTCTTCACGCTTGAGCTTGTTGAT CGCCTTCACGCCCATGAAGATGGCAAAGGCCACGATCAGGAAGTCGATCACGGTCTGGATGAACTTGCCATACGCCAGCATCACCGCTGGCACGTCACCT
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Amino Acid Sequence |
>ferredoxin--NADP reductase
MTASAEKFTRQTLLDVQPLTPNLFSLRVTRDAGFRFRSGQFARLGVTKADGSVVWRAYSMVSAPHDEHLDFFSIVVPGGEFTSELSRLGAGDTLLIDRQA FGFLTLDRFVGGRDLWLLATGTGIAPFMSILQDFEAWERFDSIKLVYSVREAKELAYVDEIAGLEQRDYLAEYAGKLQFIPVVTREQHPGALNQRITTLI ENGELEKAAGLELSPEHSRVMLCGNPEMIDETRKVLKARDLQLSLSKRPGQVAVENYW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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