Pseudomonas putida S12, RPPX_RS11580
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S12, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTCTTGCCTTGAACGCTGCCATCCAGGCCTCGCTGGCCGGTGAGGCCGGCCGCGGGTTTGCCGTGGTTGCCGACGAGGTGCAGCGCCTGGCCGAGCGCTC ATCGTCTGCCACCCGCCAGATCGAGGCGCTGGTGCGTACCATTCAGGCCGATACCAACGAAGCGGTGATCTCCATGGAGCAGACCACCGCCGAGGTGGTG CGTGGCGCACGCCTGGCCCAGGATGCCGGGGTGGCGCTGGCCGAGATCGAAGGGGTATCGCAGAACCTCGCCGACCTTATCCACAGCATTTCCGACGCTG CCCAGTTGCAGACCTCGTCGGCCGGGCAGATCTCCCACACCATGGCGGTGATCCAGCAGATTACCGCACAAACCTCCGCCGGCTCCGGTGCCACCGCCGA CAGCATCCGCCATTTGGCCCGCATGGCCAGCGAGATGCGCCGTTCGGTGTCCGGTTTCACCCTGCCACCCCCTACCGAGCCGCGTTAAGGAATAGTGACC
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| DNA Sequence for Gene |
>RPPX_RS11580
ATGGCTTCTGCAGTAAGCCCCGAACGTCACGAAACAGTGGCGCTGGCCTGGACCAAGGCCGCCATCCTCGATTGCCTGGGCCAGGCACGGCAGGCGCTGG AGCGCTTTGCCGGCGAGACGGGCGACCTGTCGATGATGGCTTTCGTGGTCGACAACCTGCACCAGGTGCACGGCTGCCTGCGCATGCTCGAACTGCGCGG CGCCACGCGCCTGGCCGAGGAGTTGGAGCTGTTTGCCAGGGCGTTGGCCGACGGCCAGGTCAGCCCCCGGGGTGATTGCCTGGGTGCATTGTTCCGCGGC CTGGAGCAGTTGCCCTCGTACCTGGAGCGGTTGCGCGGTGCTCGCCATGACCTGCCACTGGTGATGCTGCCGTTGCTCAACCAGCTGCGCGCCTGCCGGG GGGAGGAACCGCTGGCCCAGGCCAGCCTGATGACCGGCGCCGCCCAACGCTTCGCGGGTGACGATGACCTTGCCAACCTCGACCTGTCGCTGGGCAACTG GCGTGACCAGCTGCAGGCCGGGTCGGGGCGCGATGCGCTGCGTTCAGTGGTGACTGCACTGTGCGACGACTTGATGCGCATCAAGGAGCGCCTGGACCAG TACGGCCGCGGCGACCGTCAGCACCGCGAGCAGCTCGATGCGCTGCTGGCACCGTTGCGCCACGTGGCTGACACCCTGGCGGTACTGGGCTTTCAGCAAC CGCGGCGGGTGATCATCGACCAGGTGCTGGCGTTGCAGGCATTGGCTCAGGGCGAGCGGGCGGTGGACGACGCGGTGTTGATGGATGTGGCAGGGGCCCT GCTGTACGTGGAGGCCTCCCTGAACGGCATGGTCGGCCCTTTGGAGGAAAACGGCCAAGGTAGCCTGCCGGGCTCGGACCTGGCCGAGATACGCCAGCTG GTGCTGAATGAATCGCTGAACGTGTTGCAACAGGCCAAGGATCTGATCGGCGATTACCTGGAGTCCGACTGGCCGCGGCAACGCCTGCAACCCTTGCCGG GGCTGCTGCAGCAGATCCGCGGGGCACTGGCCATGTTGATGCTGCCCGCTGTGGCCGAGCTGTTTGTCGGCTGCGCAAGCTATGTGCAGCGTTGGCTGCA GCACCTGGAGGAAGAGCCGCCGATTGATGAGCTGACGCACTTGGCCGAGGCACTGAGCGCTGCCGAATGCTACCTGCAATGGCGAGCGGCAGACCCGCTG GCCGATGGTCAACCCTTTATCGAGATGGCACGGGCCAGCTTGGCGGCGCTGGGTGTGCAGTGCGCGGTGGTCGGGGCCAGCCCAGACCAGTACGGCAATG GCGATGGCATCGATGACGAGCTTCGCCAAGTGTTCCTTGACGAGGCGGGCGAACTGCTGCCGGAAATCGAGCGCCACTGGCTGCGCTGGCGTGCCGACAA CCAGCAGCGCGAGGCACTGGGCGAAGTGCGTCGTGCGCTGCATACACTCAAAGGCAGCGGCCGCATGGTGCATGCCGAGGCGGTGGCTGAACTGGCCTGG GGCGCCGAGCACCTGCTGAACCGGGTGCTCGAGGGCCGCAGCGTGCTCAGCCCGGAAGGGGTTGTAGCGCTGCAGCAGGTGTTCGTTCACCTGCCTGACC TGCTGGCCGACTTTGCCGCCGGCCAGTTGCCGCAACTGACTGAAATCGAGCAATTGGCCGGGCATCTACACAGCCTGGCCGAAAACGATGCCCCGGCGGC TGCCGGTGTCGATGGCCTCGATCCGCAGTTGCTGGGCATTTTTCGCACCGAGGCGCAGGGTCATCTGGCCAGTCTTGAGGTTTATCTGCAAAGCGCCGGC GGCCACGACACGCCGGTCAGCGATGACTTGCAGCGTGCCTTGCATACACTCAAAGGCAGTGCCGCCATGGCCGGTGTGATGCCGGTCGCCGAACTGGCCA CCGCCTTCGACCGCCTGGCCCGTGAATACAAGGGCCATCAGCTGCCACTGCAAATGGCCGAGATGGAGTGGCTGGAAGCTGCGCGCTCGTTGTTCCATCT GGGCTTGGCGCAACTCGATAGCACGCCCCTGGCCGCCATCCCCGGTGCCGCGGAACTGATCGAGCAGGTGGGCCAGGCCGTGGACAGCCGCCTGGCCAGC CTGCATGAAGACCCGCACCAGGCCGGCCGCAGCAAGCGTGATCCGCAGTTGGTCGCCAGCTTTCTGGCCCAGGCCATGGACATCCTGCTCGATGCAGAGA CGTTGTTGTCGCGCTGGCAGCAACAGCCCGGCCAGCGTGCCGCACTGGATAACCTGCTCGACCAGATGACCACCTTGGGGCACGCCGCGCACCTGGCCGA CCTGTGGCAGATGGATGAGGTGTGCGAGGCGTTGCTGGACCTGTATGGCGCGGTGGAGGAAGGCAGCCTGCCTGCCGATTCCCGCTTCTTCAGCCAGGCG CAGCGGGCCCATGAAGCGTTGCTGGACATGCTGGACGAAGTGGCGGCCGGGCAGGATATTCCACCGCGCCCGGAGCTGGTCGAAAGCCTGCGCAACCTGC TGGACCAGGCCCTGGCACCGGATGCCACCGGCCTGGTGGGCATCGATACGGTCACACCGCTGCATCCGGACATGGACCTGGCCGATACCTTGGGGTTGCC ACACCCACCGTTGCAGCCGCAGGTGGCCGAGCCGCTTGCCGAGGAGGCGGAAAGCCCTGGCGAAGAGCTGCTGGAAGTGTTCCTGGAAGAAAGCTCGGAC ATCGTCGAGAGCGCCGCGGCGGCTCTGGCGCGCTGGCAGGCCGACCCGCGCAGCAGCGTCGAGGTGGACAACCTGATGCGTGACCTGCACACCCTCAAAG GCGTGGCGCGCATGGTCGAAATTACCCCGATCGGCGACCTGGCCCACGAACTGGAGTTCCTCTACGAGCTGTTGGCTGCGGGTAGATTGCCGCCAAGCGC GCCGCTGTTCGCACTGCTGCAGAACTGCCACGACCGGCTGGCGCATATGCTTGACGCTGTGCGCCTGGGGCAGCCGCTGCATGCCGCTACAGCGCTGATC GACTACATTCGCAACTTCAGCAGCGCCGCACTGACAGACAGTGCCGCGGGCCAGGGGCCGCCAGAAGCTGCAACTGCCGAAGTACCGGCAGTAGCGCCAG AGCGGGCACCGGGTGACATGGTCAAGGTCGACGCCGAGCTGCTCGACGACCTGGGTAACCTGGCCGGCGAGCACTCGATCATCCGGGGGCGCATCGAGCA GCAGGTCAACGACGCGCAGTTCGCCCTTAACGAGATGGAAACCACACTCGAGCGCATGCGTGATCAGTTGCTGCGTCTGGATGTCGAGACCCAGGGGCGA ATCTCCAGCCGGCAGCAGTTCGAAGGCGATGCCTATGACGACTTCGACCCGCTGGAAATGGACCGCCACTCCCAGCTGCAGCAACTGTCACGGGCCCTCT TCGAGTCTGCCTCGGACCTGCTCGACCTGAAGGAGACCCTGGCTCAGCGCGCTCAGGAGGCCTACAGCCTGCTGCAACAGCAGGCGCGGGTGAACAGCCA GTTGCAGGAGGGCCTGACGGCCACCCTGATGGTGCCGTTCGAGCGCCTGGTGCCGCGCTTGCAGCGTGTGGTGCGGCAGGTAGCCAGCGAGCTGGGCAAG CAGGTGGAATTGGTGGTTGGCAATGCCGAGGGCGAACTGGACCGCAGCGTGCTGGAACGTATGGTGGCGCCGCTGGAGCATATGCTGCGCAACGCCGTTG ACCACGGCCTGGAAAGCCGCGCAATGCGCCTGGCCGCCGGCAAGCCGGAGCAGGGCACCATTCACCTGAATTTGCTGCATGAGGGCGCCGATATCGTCAT CGAAATGACGGATGATGGTGCCGGCGTGCCCTTGGAGGCGGTGCGGCGCAAGGCCATCAAGCGCGGCCTGCTGGACCCGCAGGCGCAGTTGAGTGACCAC GAGATCCTGCAGTTCATCCTGCGGCCAGGCTTCTCCACCGCCGAAAAGATCACCCAGATTTCCGGGCGTGGGCTGGGCATGGATGTGGTGCACGAGGAGG TCAAGCAACTGGGTGGCTCGATGAGTATCGAGTCGGCGCAGGGCAAGGGGGCGCGTTTCCTGATCCGCCTGCCGTTCACCGTGTCGATCAACCGTGCGCT GATGGTGCACCTGGGTGAAGAGCAATACGCCATTCCGCTCAATACCATCGAGGGCATCGTCCGTGTGCCACCTGCCGAGCTTGCGGCGTGCTACCAGCTG GACTCGCCCCGCTATGTCTATGCCGGCCACGAATACGAGCTGCGCTACCTGGGCGAGTTGCTGCAAGGCCTGCCGCGCCCGGCGCTGCTGGGGCAGAGCG TGCCGTTGCCGGTGCTGCTGGTGCATTCCAAGGAGCAGTCGTTCGCCATCCAGGTCGACAGCCTGTCGCCCAGCCGCGAGATCGTGGTGAAAAGCCTGGG ACCGCAGTTTGCCGCGGTTGCCGGGTTATCGGGGGCGACACTGCTAGGCGATGGCCGGGTGGTGCTGATTCTTGACCTGCTGGGCCAGCTGCGCGGCCAG CAGCGACGGCTGGCCCGCCTGCCCGGTGGCGGCAGCCAGCGCCAATTGCTTGGCCCGGCACCGCGCCGTGCCTTGCTGGTGATGGTGGTGGACGATTCGG TAACCGTACGCAAGGTGACCAGCCGCCTGCTGGAGCGTCACGGCATGAGCGTGCTTACGGCCAAGGATGGTGTCGATGCCATGGCCCTGCTGGAAGAGCA CCGGCCTGACGTGTTGTTGCTGGACATCGAAATGCCGCGCATGGACGGCTTCGAGGTGGCCACACGCATTCGCCGTGACGCACGGCTGAAAGACTTGCCG ATCATCATGATCACCTCGCGCACCGGCCAAAAGCACCGGGACCGCGCCATGGCCATCGGCGTCAATGAATACCTGGGCAAGCCGTACCAGGAATCGCTGC TGTTGCAGAGCATCGCCCATTGGAGCCAGGCCCATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACTGATTTCCGGCCAGCGCAGCAGCCTGACCGGGCTGTTGCTGCCGTTGGGCGACCGCACGCTGGTGTTGCCCAACGTGGCGGTGGCCGAGTTGAGCGGG CAGCGTAACCTGGTGTGCCAACACGGCGACCCCGCCTGGCACCTGGGGTGGATCGACTGGCGTCAGCAACGCCTGCCGTTGATCGGTTTCGAGGCCGCAT GCGGTGGTGAGACGCCGTGCGGCGAGCGGGCTCGCGTGGTGGTGCTCAATGCGTTGGGCGATACCGGTTTGCGGTACCTGGCGCTGTTGCTGCAGGACAT TCCGCGCTCGTGCAAGCTCGACAGCCAGCTTAACTACGTGGATGTGGCGCTGGGCAGGTTGGAGCTGGCAGCGGTGCAGGTGGGTGAGCAGGTGGCGCGG GTGCCGGACCTGGTCGCATTGGAAAGGCTGGTGCGTGACGCGGATCTGCAACCTGACCTTGGTTAGGATGTGAAGCGCAGGGTCTGGTGGTCTGGAGTGG
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| Amino Acid Sequence |
>chemotaxis protein CheA
MASAVSPERHETVALAWTKAAILDCLGQARQALERFAGETGDLSMMAFVVDNLHQVHGCLRMLELRGATRLAEELELFARALADGQVSPRGDCLGALFRG LEQLPSYLERLRGARHDLPLVMLPLLNQLRACRGEEPLAQASLMTGAAQRFAGDDDLANLDLSLGNWRDQLQAGSGRDALRSVVTALCDDLMRIKERLDQ YGRGDRQHREQLDALLAPLRHVADTLAVLGFQQPRRVIIDQVLALQALAQGERAVDDAVLMDVAGALLYVEASLNGMVGPLEENGQGSLPGSDLAEIRQL VLNESLNVLQQAKDLIGDYLESDWPRQRLQPLPGLLQQIRGALAMLMLPAVAELFVGCASYVQRWLQHLEEEPPIDELTHLAEALSAAECYLQWRAADPL ADGQPFIEMARASLAALGVQCAVVGASPDQYGNGDGIDDELRQVFLDEAGELLPEIERHWLRWRADNQQREALGEVRRALHTLKGSGRMVHAEAVAELAW GAEHLLNRVLEGRSVLSPEGVVALQQVFVHLPDLLADFAAGQLPQLTEIEQLAGHLHSLAENDAPAAAGVDGLDPQLLGIFRTEAQGHLASLEVYLQSAG GHDTPVSDDLQRALHTLKGSAAMAGVMPVAELATAFDRLAREYKGHQLPLQMAEMEWLEAARSLFHLGLAQLDSTPLAAIPGAAELIEQVGQAVDSRLAS LHEDPHQAGRSKRDPQLVASFLAQAMDILLDAETLLSRWQQQPGQRAALDNLLDQMTTLGHAAHLADLWQMDEVCEALLDLYGAVEEGSLPADSRFFSQA QRAHEALLDMLDEVAAGQDIPPRPELVESLRNLLDQALAPDATGLVGIDTVTPLHPDMDLADTLGLPHPPLQPQVAEPLAEEAESPGEELLEVFLEESSD IVESAAAALARWQADPRSSVEVDNLMRDLHTLKGVARMVEITPIGDLAHELEFLYELLAAGRLPPSAPLFALLQNCHDRLAHMLDAVRLGQPLHAATALI DYIRNFSSAALTDSAAGQGPPEAATAEVPAVAPERAPGDMVKVDAELLDDLGNLAGEHSIIRGRIEQQVNDAQFALNEMETTLERMRDQLLRLDVETQGR ISSRQQFEGDAYDDFDPLEMDRHSQLQQLSRALFESASDLLDLKETLAQRAQEAYSLLQQQARVNSQLQEGLTATLMVPFERLVPRLQRVVRQVASELGK QVELVVGNAEGELDRSVLERMVAPLEHMLRNAVDHGLESRAMRLAAGKPEQGTIHLNLLHEGADIVIEMTDDGAGVPLEAVRRKAIKRGLLDPQAQLSDH EILQFILRPGFSTAEKITQISGRGLGMDVVHEEVKQLGGSMSIESAQGKGARFLIRLPFTVSINRALMVHLGEEQYAIPLNTIEGIVRVPPAELAACYQL DSPRYVYAGHEYELRYLGELLQGLPRPALLGQSVPLPVLLVHSKEQSFAIQVDSLSPSREIVVKSLGPQFAAVAGLSGATLLGDGRVVLILDLLGQLRGQ QRRLARLPGGGSQRQLLGPAPRRALLVMVVDDSVTVRKVTSRLLERHGMSVLTAKDGVDAMALLEEHRPDVLLLDIEMPRMDGFEVATRIRRDARLKDLP IIMITSRTGQKHRDRAMAIGVNEYLGKPYQESLLLQSIAHWSQAHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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