Pseudomonas putida S12, RPPX_RS11365 (proY)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S12, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCCTGTCGCACCCGCACAGCGTCGACAGCCTGCCAACTTCGGCCAACCAGGAAGACCACGTGTCGATGGCCCCGGCCGCCGGCAAGCGCCTGTGGGAA ATGGCCGAAAACACCCGTGGCGTGCTGGCCATCGAATGGCTGGGCGCGTGCCAGGGCCTGGACCTGCGCAAAGGCCTGAAGACTTCGGCCAAGCTGGAGC AGGCGCGCCAGGCGCTGCGCAGCGAGGTGCCGCACTACGACCGTGACCGTTTCTTCGCGCCGGATATCGAAAAAGCCGTGGACCTGTTGGCCAAGGGTAG TCTGACCGGTTTGCTGCCGGCGGGTGTGCTGCCAAGCCTGTAATGCTCCTTGGGGCCGCTTGGCGGCCCTTCGCGGTCAAGCCCGTTCCTACACAGCCTG CGATAGGCAAACGCTATCCATGTAGGGCGGGCTTGCCCGCGAAGGGGCTGCGCAGCAGCCGCTCAATCTCACGACCACAAAAACAATTCAAGGACGTGAC
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| DNA Sequence for Gene |
>RPPX_RS11365
|proY
ATGCAACAAGCTCAAGGTCTCAAGCGCGGGCTAAGTGCCCGCCACATCCGTTTCATGGCCCTCGGCTCCGCCATCGGCACCGGCCTGTTCTACGGCTCTG CCTCGGCCATCCAGATGGCAGGCCCGGCCGTGCTGCTGGCCTACCTGATCGGTGGCGCTGCAGTGTTCATGGTCATGCGCGCCCTTGGCGAAATGGCCGT GCACAATCCGGTGGCCGGCTCCTTCGGCCACTACGCCACCACCTACCTCGGCCCAATGGCCGGCTTCATCCTCGGCTGGACCTACGCTTTCGAGATGGTC ATCGTCGCCATCGCCGACGTCACCGCGTTCGGTATCTACATGGGTTTCTGGTTCCCGGAGGTAGCCCGCTGGATCTGGGTGCTGGGCATCGTTTTCCTGA TCGGCGGCCTCAACCTGTGCAACGTCAAGGTATTCGGCGAAATGGAATTCTGGCTGTCGCTGCTCAAGGTCGGCGCCATCGTGGCGATGATCCTGGCCGG CCTCGGCATCATGGCCTTCGGTTTCAGCCAGGTGGGTACCGGGCATGCCGTAGGCATGAGCAACCTGTTCGACCACGGCGGCTTCATGCCTAACGGCGTG GGGGGCTTGATTGCGTCGTTTGCCGTGGTGATGTTCGCCTTCGGCGGTATCGAGATCATCGGCGTCACCGCCGGCGAGGCAAAAGACCCGCAGCGCGTCA TTCCCAAAGCGATCAACGCGGTGCCACTGCGTATCCTGCTGTTCTACGTGCTCACCCTGTTCGTGCTGATGTGCCTGTACCCATGGCCGCAGATCGGTAG CCAGGGCAGCCCGTTCGTGCAGATCTTCAGCAACCTGGGCATTGGCTCTGCCGCTGCCGTGCTGAACGTCGTGGTGATTTCCGCTGCCATCTCCGCCATC AACAGCGACATTTTTGGCGCTGGCCGCATGATGTATGGCCTGGCCCAGCAAGGCCACGCCCCGCGCGGTTTCAGCAAGTTGTCAAAACATGGCGTACCGT GGATGACCGTCGTGGTGATGGGGGCTGCGCTGCTGATCGGCGTATTGCTCAACTACCTGATCCCGGAAAATGTGTTCCTGCTGATTGCCTCGATCGCCAC CTTCGCCACGGTGTGGGTGTGGCTGATGATCCTGCTCACCCAGGTAGCCATGCGCCGCAGCATGAGCCGCGAGGAAGTGGCCCAGCTCAAGTTTCCGGTA CCGTTCTGGCCATACGGCCCGGCCATGGCCATTGCGTTCATGGTGTTCATCTTTGGCGTGCTCGGCTACTTCCCGGACACCCAGGCGGCATTGATCGTCG GCGTGATCTGGGTGGTGTTCCTGGTGGCGTCCTACCTGCTGTGGTGCAAGCCGCGCGCAGGGCAGGGCCAACCGGTAGCGGAGCCGGCCGAGCTGCACCG CTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAAAGGAGATTGTGCATGAGAACCCTCTGGCAGCATTGCCATGTTGCAACCATGGCCGATGGCCGTTACTCGGCCATCGAGGACGCGGCGATCGTCACCA GCGCCGGGTTGATCGAGTGGATAGGCCCACGCGCCGAGCTGGCGCCGGTCGAAGCTGACCGCACGGTTGACCTGGGGGGGGGCTGGGTCACCCCCGGGCT GATCGACTGCCACACCCATGCGGTGTTCGGTGGCAACCGCAGCGGCGAGTTCGAGCAGCGCCTGCAGGGCGTGAGCTATGCCGAAATCGCCGCGCAGGGC GGTGGTATCGCGAGTACCGTGCGGGCTACCCGGGCAGCCAGCGAAGACGAACTGTTCGCCAGTGCTCGCCAGCGCGTTCAGGCACTGATGCGCGATGGAG TGACCACCCTCGAGATCAAGTCCGGCTACGGCCTGGACCTGGCCAACGAGCGCAAGATGCTGCGAGTGGCCCGGCGCCTGGCTGACGAGTTGCCGTTGAC
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| Amino Acid Sequence |
>permease
MQQAQGLKRGLSARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIGGAAVFMVMRALGEMAVHNPVAGSFGHYATTYLGPMAGFILGWTYAFEMV IVAIADVTAFGIYMGFWFPEVARWIWVLGIVFLIGGLNLCNVKVFGEMEFWLSLLKVGAIVAMILAGLGIMAFGFSQVGTGHAVGMSNLFDHGGFMPNGV GGLIASFAVVMFAFGGIEIIGVTAGEAKDPQRVIPKAINAVPLRILLFYVLTLFVLMCLYPWPQIGSQGSPFVQIFSNLGIGSAAAVLNVVVISAAISAI NSDIFGAGRMMYGLAQQGHAPRGFSKLSKHGVPWMTVVVMGAALLIGVLLNYLIPENVFLLIASIATFATVWVWLMILLTQVAMRRSMSREEVAQLKFPV PFWPYGPAMAIAFMVFIFGVLGYFPDTQAALIVGVIWVVFLVASYLLWCKPRAGQGQPVAEPAELHR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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