Strain | Pseudomonas putida S12, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGTGCCCTCGACCCGCAAACCACGGCCTCGGTCCTGCAACTGCTGGCCGAGATCAACCGTGAACTGAAGCTGACCATCGTGTTGATCACTCACGAGATGG ACGTGATCCGCCGTGTCTGCGACCGCGTGGCAGTGATGGACGCCGGTCAGATCGTCGAGCAAGGCTCGGTGGCCGAGGTGTTTCTGCACCCCCAGCACCC CACCACCAAACGCTTCGTCCAGGAAGACGAGCAGGTCGACGAAGGCGAGCAGCGCGACGACTTTGCCCACGTGCCAGGCCGCATCGTACGCCTGACCTTC CAGGGCGACGCCACCTACGCACCGCTGCTGGGCACCGTGGCCCGCGAAACCGGTGTGGACTACAGCATCCTCGCCGGGCGTATCGACCGCATCAAGGATG TCCCCTATGGCCAGCTCACTCTCGCCCTGATCGGCGGAGACATGGAAGCGGCGTTCGCCCGCTTCAAGGCAGCTGACGTACATATGGAGGTACTGCGTTG
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DNA Sequence for Gene |
>RPPX_RS08805
ATGGACGCCCTGAATTTCTTTGCCAACGTCGACTGGGCCGAAATCTGGCTGGCCACCGTCGACACCATGATCATGCTGTTCGGCTCGCTGTTCTTCACCG TGCTGCTGGGCCTGCCACTGGGCGTGCTGCTGTTCCTCTGCGGGCCAAAGCAGATGTTCGAACAGAAAGGCGTCTACGCGCTGCTATCGCTGGTGGTCAA CATCCTGCGCTCGCTGCCATTCATCATTTTGCTGATCGTGATGATCCCGTTCACCGTGCTGATCACCGGTACCTCGCTGGGCGTTGCAGGCGCCATCCCG CCGCTGGTGGTGGGTGCCACGCCGTTCTTTGCGCGCCTGGTTGAAACCGCCTTGCGTGAAGTGGACCGCGGCATCATCGAAGCCACCCAGTCGATGGGCG CCACAACCCGCCAGATCATCACCAGTGCGCTGCTGCCGGAAGCCCGTCCGGGCATCTTCGCGGCCATTACCGTAACCGCCATCACCCTGGTTTCTTACAC CGCCATGGCCGGTGTGGTGGGTGCCGGTGGCCTTGGTGACCTGGCTATCCGGTTCGGTTACCAGCGTTTCCAGACCGATGTGATGGTAGTGACCGTGGTA CTGCTGCTGGTACTGGTTCAAGTACTGCAGAGCGTGGGCGACAAACTGGTCGTGCATTTTTCCCGTAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCCAATGGGGTCGGCCTGGCCGACCCGTTCGGGGGCCGTCGCGGCCCTCACAAGGAGTGATCAATGAAGAAGCTGCTTGCTGTCGCTGCCGCTGTCGCG GCCTTCTCGGCCCAGGCCGATACCCTTACCGTCGCCGCCACCCCGGTGCCGCACGCCGAGATCCTCAACTTCGTCAAACCACAACTGGCGAAAGAGGGCG TAGAGCTGAAGGTCAAGGAATTCACCGACTACATCCAACCGAACGTACAGGTGGCCGAAAAGCGCCTGGACGCCAACTTCTTCCAGCACCAGCCTTACCT GGATGAGTTCAACAAGGCCAAGGGTACCCAGCTGGTGAGCGTGGCAGGCGTGCACATCGAGCCACTGGGCGTGTATTCGACCAAGATCAAGAAGCTGGAC GAGCTGTCCTCCGGCGCCACCGTGGTCATCCCCAACGACGCCACCAACGGCGGCCGCGCCTTGCTGCTGCTGGACAAGGCTGGCGTGATCAAGCTCAAGG
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Amino Acid Sequence |
>ABC transporter permease
MDALNFFANVDWAEIWLATVDTMIMLFGSLFFTVLLGLPLGVLLFLCGPKQMFEQKGVYALLSLVVNILRSLPFIILLIVMIPFTVLITGTSLGVAGAIP PLVVGATPFFARLVETALREVDRGIIEATQSMGATTRQIITSALLPEARPGIFAAITVTAITLVSYTAMAGVVGAGGLGDLAIRFGYQRFQTDVMVVTVV LLLVLVQVLQSVGDKLVVHFSRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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