Pseudomonas putida S12, RPPX_RS08525

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S12, complete genome. [Details]
DNA Sequence Upstream of Gene
ATTGCTCGAGAGCGAGGCGCTGCGCCAGTCTATCCCGCTGCTTGATGCCAGCGACATCGCCAGCGCCCGCGGGTATATCCAGCAACTGGAGAATGAGACC AGCCATACTGAAATTGGCCGTCTCAACCGCCTGCTCCACATGGCGCTGTACAGCAAAGCGCCGAACAAGAAACTACTGCGCCTTATCGAGAACGAATTGA ACGAGGAAGAACGTTTCTTGCGTTTCCATCTTTCGTCCATGGGCCTGGGCAAGCTCACTCAGGACGATCACAACGCACTGGTAGATGCAGCCAGCGACAA GCTGGTGGACGAAGCGGTAGCGGTGCTGGAACGGCACCTCAATGGCGGGGCACGGGTGATCCGCAACTACCTGGATACGCAATTGGGGCATTAGCCCATT ACCGGCTTTACGCGGTAACTGATGGGTTGCAAATTAATCTTGCTCCGCCAACAATGAGACTAATTATCATTAACGTCCATTGATGCCGGCGCCCTCCTCC
DNA Sequence for Gene
>RPPX_RS08525
ATGCCCAGCAACGATTCCGTGCAAACGCTCTACAGTGACCACCACGGCTGGTTGCATACCTGGCTGCGTAGCAAGCTCGGCAACGCAGCCGATGCGGCTG ACCTCGCCCAGGATACCTTCGTCCGCCTGCTACAGCGTCGTGAACAATTGCAGCTGAATGCTCCCAGGGCCTTCCTGCGCACGGTAGCGCGTGGGTTGGT GATCGATCATTGGCGCCGCGAGGAACTGCACAGGGCTTACCTGGAGGCCTTGGCCCATGTGCCGGAAGCACTGGTCCCCTCAGTCGAGACCCGCGAGCTG CTGCTGGAATTGCTTGAGCGTATTGCGCGCATGCTCGACGGTCTCAAACCCAAGGTACGCCGCGCATTCCTGCTGGCTCAATGCGAGGGGCTGAAGCATC AGGCCATCGCCGAACAGATGGGGATCTCCGTGCGCACCGTTGAGCGCTACATCGCCGATGCGCTCTATCACTGCTACGTGCTGCGCTATGAAGACGACTG CTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATCCATGACCGTCGCACGCCCTGATACAAAAACGGTCAGGCAGGCCATTCAGTGGATGCTGCGGCTGCGTGAAAGCGGACACGATCCGGCTTTGCAACAA CAGTGCGAGCAATGGCGCAGCACCCACCACGAAAACGAACAGGCCTGGCAGCGTGTAGTTCACCTTCATCAGGACCTCGACCTGCGCGCTATCCCCGGTG CCGGGCTGGCATTGCAGACACTGGAAACCAGCCAGCAGCGCCTGCGCCGTCGGCAGGCACTGAAGCTGCTTGGTGGCGTTGTCATGGCAGGGTCGGCGAG CTGGCTGGCCAAAGACCTCAATACTGTGAGTGCCTGGGCGTCAGACTATGCCACCGGCACGGGCGAGCGACGCGTCTTCACCCTGCCCGATGGCTCGATG ATGCAACTCAATACCTGCAGTGCCGTGGACCTGGCCTTCCATGATCAACGGCGCCTGGTCCGCCTGAAGCATGGGGAATTGATGATCAACTGCAACCCTC
Amino Acid Sequence
>RNA polymerase sigma factor
MPSNDSVQTLYSDHHGWLHTWLRSKLGNAADAADLAQDTFVRLLQRREQLQLNAPRAFLRTVARGLVIDHWRREELHRAYLEALAHVPEALVPSVETREL LLELLERIARMLDGLKPKVRRAFLLAQCEGLKHQAIAEQMGISVRTVERYIADALYHCYVLRYEDDC
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site