Pseudomonas putida S12, RPPX_RS08510
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S12, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TACCGAGCTTGAACGGTTGCAAGTGGTCAACCGCTTCTTCAACCAGCAATTGCGTTATGTCGAGGATATCGATCTGTGGCATGAGGTCGACTACTGGGCC ACACCTGTGCAGGCACTGATCAAAGGTGCAGGGGACTGCGAGGATTACGCCATCGCCAAATATTTCAGTCTACGGCGCATGGGAATCCCCAGCGAAAAAC TGCGCATCACCTACGTCAAGGCGCTGCGGCAGAACCGGGCACACATGGTCCTGACCTATTATTCAAGCCCACAGGCCCAGCCTTTGGTGCTGGACAGTCT GATGGATGCCATAAAGCCGGCAAGCCAGCGTAGCGACTTGCTGCCGGTGTACGCCTTCAATGGCGAGGGGTTGTGGCTGACGGGCGCCGCAGGGAACAAG AAGGTTGGTGATACCAAACGGCTGTCACGCTGGCAGGATTTGTTGAAGAAAATGCAGGCCGAAGGGTTCCCGGCCGAGCCGGTTTACTGAAGGAGCACAG
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| DNA Sequence for Gene |
>RPPX_RS08510
ATGTCACTGTTCAAACAATTGCTGTTGGCCATTTGCCTGTTCCTGGTGGTCGCCTTCAGTGGCAGTTTCATGGTCAGCCTGGAAAGCTCGCGCAGCCAGT ACGTCAACCAACTGCGCTCGCACGCCCAGGATGCGGCCACCGCGCTGGCGCTTTCTCTGACGCCGAATATCGACGACCCAGCGATGGTCGAGCTGATGGT CAGCTCGATTTTCGACAGTGGTTACTATGCAAGCATCAAGGTCGTCGACCTGGGTTCCAACGCCGTGCTGGTGGAGCGTCAGGCCGAGCCAGACCCTGGC GGTGTGCCGCTTTGGTTTGTGCGCCTGATCGGCCTCGAGGCCGCCGGCGGCGATGCAATCGTCAGTCGTGGCTGGCAGCAGGCCGCGCGCGTTGAAGTGA TCAGCCACCCGATGTTCGCCATTGCCAAGCTTTGGCAAAGCGCCTTGGGCAGCCTGGGTTGGTTGCTGTTGTGCGGTGCGGCCAGTGCAGTGCTCGGTGC TTTGCTGTTGCGCCGCCAGTTGAGGCCGCTGGACTACATGGTCGAGCAATCCCACGCTATTGCTCGCCGCGAATTCCTCAGCCTGCCAGAGTTGCCACGC ACGCCGGAGCTTCGCCGTGTGGTGCAAGCGATGAATCAGATGGTCGAGAAGCTCAAAGCCCTGTTCACCGAGCAAGCCGAGCGCAGTGAGCGGCTGCGTG CGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGACGCTATTTCGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGG CTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGTGGCCAGCGTACAGACCAGTTGCTGCAAGCGGTAGGTGAACAGCTG CGTCGTACTTGTGCCAGCTACCCGGAAACCAACGACCTCATTTCCCGCAGCCGCGGCGGCGAGTTTGCAGTGCTGGCACCGGGCATGGTGCATGAGGAGG CAGTACACCTTGCCCAGGCTCTGGAGGCAACATTGCAAAGCCTGCACGAAACGGGGGCCAGTGATATCGACCCGGTGGCTTGTATAGGCCTGGCACCATT CAGCCCTGGTGATTCACCACAGGCGTTGCTGAAGCTCGCCGACGAGGCTCTGGCCCGCGCTGAGAATCAGCCAACGCCGGGGTGGGTATGCCTTGAGCAA GGTGTTGCTGCGGTTGCTGCGGATAGCCAGCATGCCTGGCACGAACGGCTCGACCAAGCGTTCATCAATGGGCATTTCGAGCTGTTCTTCCAGCCAGTGA TGGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCACGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTG GCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAGGTGCTGGCGTTGAACCTG TCCGCCGCCACCCTGGCCGACCCCAAGGCCCTTCAGCGCATTTTCGAGCTGCTGAGTCAGAATGCGGCGCTTGGCCCGCGGCTGGTTTTTGAAATTGGCG AGGAGCAGTTGCCTGAGCAGGCCGCATTGGAGCAACTCACCCGTCGCCTGCATGGGCTTGGCTTTGGGTTGGCTTTACAACGCTTCGGTGGGCGCTTCAG CATGATTGGCAACCTGGCGCACTTGGGCCTGGCGTACCTGAAGATTGACGGCAGTTACATCCGCAACATCGATCATGAGCAGCACAAGCGGCTGTTCATC GAAGCGATCCAGCGTGCGGCGCATAGCATCGACCTGCCACTGATTGCCGAGCGAGTCGAGACGGAAGGGGAGCGGTTGGTGTTGCTGGAGATGGGAGTGG GCGGGATTCAGGGGCAACTGGTGGGTGAGCCTGCGCCTTGGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGGCCTCTCGCGCGCCGCTGCAGAAACGGCCTAGAGCCGCCAAAGGGCCGCGTAGCGGCCCCAGGATTTACGCAGCGATGTACAGGGCCGCTCCTACAG CAATGACGAAACCAGCAGGTTGGCTATCACCGCTCGCGCAGCGCCTCCGAGCGCGCCTTCATGATCGGCTTGAGCAGGTAGCTCATGATGGTTTTCTTGC CTGTCATGATGTCCACCGTCGCCACCATCCCCGGAATGATCAGCAGTGGCTTCTCGTCAGTCCCCAGGTGGCTGCGATCAGTGCGCAGCTTGATCAGGTA ATACGTAGTCTTCTTGTCTTCATCGGTAATGGTGTCGGCGCCAATCTGCTCCAGCTTGGCCTTTAGCCCACCGTAGATGGTGTAGTCATACGCGGTGAAC TTGACCGTCGCTTCCTGGCCGGGGTGCAGGAAGGCGATGTCTTTGGGCAATATTTTCGCCTCGATGACCAGCGTGTCGTCCAGCGGCACGACTTCGATGA
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| Amino Acid Sequence |
>DeoR family transcriptional regulator
MSLFKQLLLAICLFLVVAFSGSFMVSLESSRSQYVNQLRSHAQDAATALALSLTPNIDDPAMVELMVSSIFDSGYYASIKVVDLGSNAVLVERQAEPDPG GVPLWFVRLIGLEAAGGDAIVSRGWQQAARVEVISHPMFAIAKLWQSALGSLGWLLLCGAASAVLGALLLRRQLRPLDYMVEQSHAIARREFLSLPELPR TPELRRVVQAMNQMVEKLKALFTEQAERSERLRAESYQDSLTGLSNRRYFEMQLNNRVSNLEDARAGYLLLLRVQGLAGLNARLGGQRTDQLLQAVGEQL RRTCASYPETNDLISRSRGGEFAVLAPGMVHEEAVHLAQALEATLQSLHETGASDIDPVACIGLAPFSPGDSPQALLKLADEALARAENQPTPGWVCLEQ GVAAVAADSQHAWHERLDQAFINGHFELFFQPVMECASSQRVLHHKVISRLRDGHGEALPAGRFLPWLERFGWMPRLDVLVLEKVLAHLRGHDQVLALNL SAATLADPKALQRIFELLSQNAALGPRLVFEIGEEQLPEQAALEQLTRRLHGLGFGLALQRFGGRFSMIGNLAHLGLAYLKIDGSYIRNIDHEQHKRLFI EAIQRAAHSIDLPLIAERVETEGERLVLLEMGVGGIQGQLVGEPAPWR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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