Pseudomonas putida S12, RPPX_RS05170
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 339 | 491 | 1.26E-46 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 334 | 490 | 8.3E-49 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 323 | 494 | 1.6E-66 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 320 | 493 | 6.3E-57 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 329 | 493 | 1.2E-51 |
| CDD | cd12915 | PDC2_DGC_like | - | - | 194 | 291 | 7.61375E-20 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 336 | 491 | 6.98593E-62 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 40 | 190 | 1.6E-19 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 331 | 492 | 8.9E-48 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 289 | 492 | 1.3E-66 |
| CDD | cd12914 | PDC1_DGC_like | - | - | 68 | 192 | 2.07869E-14 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 193 | 283 | 2.3E-20 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.