Pseudomonas putida NBRC 14164, PP4_54000
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NBRC 14164 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGATCGCCTACAAGATCTTCGACTCGATCCGCCTGCTGCAACGCGCCATGGACATGCTGCGCGAGCACTGCATCGTCGGCATCACTGCCAACGAACAGCG CTGCCGTGAACTGGTCGAACACTCGATCGGCCTGGTCACCGCCCTGAACCCGTACATCGGCTACGAAAACGCCACCCGTATCGCCCGCGTTGCCCTGGAA ACCGGCCGCGGCGTACTGGAACTGGTGCGCGAAGAGAAGCTGCTGGACGAAGAGATGCTCAACGACATCCTGCGTCCGGAAAACATGATCGCTCCACGTC TGGTTCCGCTGAAGGCGTAACCCGGCCGCTGCAAACAGTCTCACCAGGTTAAGGGACTAGACACCTCTCAACCTTTCAAGGCCCGAGCGATTGCTTCGGG CCTTTTTTTTGCCTGAGAGAAGGTGGGGTCGCAAGCGGCACCGGGATATCGGCACACAACTTGCTCCATAATGCGTCCCAGCCCCCCGGGATTACCCAGC
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| DNA Sequence for Gene |
>PP4_54000
ATGCTGCACAGTCACCTGACCACCCTCAACGCAGTTTCGCTGATCCTCAACGTCTTCCAGGCAGACGGTTGCGAGGCTTCGGCGCTGCTGGCCGGCAGCG GCATTGGCCCGGCAGACCTGGGGCACGCCGATGCGCGCATCACCACCCAGCAGGAACTGCAGGTGTGCGCCAACGCCGTAGCCCGGCGCGAGGACATCGG CCTGGAACTGGGCCGCCGCATGCACGTGTCGTGCTACGGCATGCTGGGTTACGCCCTGCTCTCCAGTGCCACTTTGGGTGACGCCTTGCGCCTGGCGCTG CAATATCCGGCACTGCTGGGAACAGTCTTCAAGCTGCGGTTGATCGACGATGGCCAGCGGGTCTGGTTCAGCGCCAGCGATTACCACGACAGCCCGGCGC TGAGCGCTTTCAACGCAGAATTCTGCATGGTGTCGCTGAAAGTCATTTGCGACGACCTGCTTGGCCGCACGCTACCATTGCTGGCCGCCCGCTTCGAGCA CCCACGGCCCGGCTATCACGCGCGCTATGCCGGTGCATTCCAGTGCCCCGTCGGTTTCGCCGCCGAGGACAATGCCTTTGCCTTCGAGCGGCGCTGGCTG GATACGCCGCTGCCGCTGGCCGACCCGATTACCCACCAAGCCATGAGCGAGCGCTGCCGGCGCCTGAACCTTGAGTTCACCGGCCGTCAGGCCTGGCTGG GGCGGATTCGCCAGCTGCTGGCACAGCAACTGGATGCCGCGCCTGGGCTGGAAGGCCTGGCACGGCAGATGAACTGCTCCTCGCGCACCTTGCGCCGGCA TTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGCTGGACGAGCTCAGGTTCGAGCGCGCCAAGCAGTTGCTGGCCGATGAGCAGATGCCCATCTACCGT ATTGCCGAAACGTTGGGGTTCAGCGAGACGGCCAGTTTCCGCCATGCCTTCCAGCGCTGGAGTGGTGTGGCACCCAGCCACTTCCGCGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGTTCCGGCCCTATCGCCGGCAAGCCGGCTCCCACAGGTACTGCGCTGCATTCAAGGCCTGTGCGGTACTAGTGGGAGCTGGCTTGCCGGCGATAGGG CCGGCACAGGCCAATCAACCTTGGCCACATCGATCCCCTTTTGGCCATTTGCGTCGTTCTCCGCTACTGACCCGCCCATGACAATGGACCCACGCCAGTA CCCACCGGAGAACAACAATGCTGACGATCTATTCCGATGACCACCGCCTGCACCATGGCCGCTGCGAGCTGATCGACGGCAAGCTGATGCCCTGCTTCGA AATGCCTTCGCGCGCCGACCATGTGCTCGACCAGGTGAAAAAGCGCAACCTCGGCGACGTCCAGGGCCCGACCGACTTCGGCCGTGCGCCGTTGCTGCGC ATCCACAGCGCCGACTACCTGAACTTCTTCGAAGGCGCCTGGGCCCGCTGGGCTGCACTGGGCCAGGAAGGCGACCTGCTGCCGTTCACCTGGCCTGCTC
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| Amino Acid Sequence |
>putative AraC family transcriptional regulator
MLHSHLTTLNAVSLILNVFQADGCEASALLAGSGIGPADLGHADARITTQQELQVCANAVARREDIGLELGRRMHVSCYGMLGYALLSSATLGDALRLAL QYPALLGTVFKLRLIDDGQRVWFSASDYHDSPALSAFNAEFCMVSLKVICDDLLGRTLPLLAARFEHPRPGYHARYAGAFQCPVGFAAEDNAFAFERRWL DTPLPLADPITHQAMSERCRRLNLEFTGRQAWLGRIRQLLAQQLDAAPGLEGLARQMNCSSRTLRRHLQALGSSYQQLLDELRFERAKQLLADEQMPIYR IAETLGFSETASFRHAFQRWSGVAPSHFRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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