Pseudomonas putida NBRC 14164, PP4_50610 (tonB3)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NBRC 14164 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGATCCTCGAAACCCTGACCGCACTGGGCACCCAGCAGATCATGGCCCAGGCTTACCTGCCAGCGATCAAGGACGGCGACAAACGCATCCTGATGATC GACGGCGAGCCAGTGGACTACTGCCTGGCGCGTATTCCGGCCAGCGGCGAAACCCGTGGCAACCTGGCCGCTGGCGGGCGTGGCGAAGCGCGCCCGCTGA CCGAGCGCGACCGCTGGATTGCCGCCCAGGTCGGCCCGACCCTGCGCGAGAAGGGCCTGTTGTTCGTGGGCCTGGACGTGATCGGCGACTACCTCACCGA AATCAACGTCACCAGCCCCACCTGCATCCGCGAGATCGATGCTGCCTACAACACCGATATCGGTGGCAAATTGATGGATGCCATTGATCGCCAGCTCAAG GCGCGCTGACAGCCAACGCGAAGCAAAGCCGCAGAGTGGGGTATGATGCCGGTCCTATTCGACTGAGCTGCTGCCCCGCCCAGCAGTTGCTGGATACCTG
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| DNA Sequence for Gene |
>PP4_50610
|tonB3
ATGACGCTGCCCGCTGACATCCCCTCCGACCTGCTGCCGCCCCGTGTTCGCCCCGTGGACCGGCTCGGCTTTACCCTGTTCCTGGCTGCCCTGGTGCACC TGGCGCTGATTCTTGGCGTCGGCTTCACCGTGGTCAAGCCTGCCGAAATCCGCCACACCATGGACATCACCCTGGCCACCTTCAAGAGCGAGAAAGCGCC CGAGAAGGCCGATTTCCAGGCTCAGGACAACCAGCAGGGCAGCGGCACACTGGACAAGAAAGCGGTGCCCACCACCACCGAACTGGCGCCGTTCCAGGAC AGCAAGATCAACAAGATCACCCCGCCACCCGCCGCCAGGCCCGAGGTGGTACCACCCCCTACCCCACAAAAGTCGGCAGTAGTGACGACTGCGCCCAAGC CGCAGAAGGTCGAACCCAAGCCCAAGGAAAGCAAGGCCCAGCCCAAGCCGGCGGCGCCAGCGCCCGACTTCGACAGCTCGCAGCTGTCCAGCCAGATCGC TAGCCTGGAGGCGGAGCTGTCCAACGAGCAGCAGATGTACGCCAAGCGCCCGCGCATCCATCGCCTGAATGCCGCCTCGACCATGCGCGACAAGGGCGCC TGGTACAAGGAAGAGTGGCGCAAGAAGGTCGAGCGGGTGGGCAACCTGAACTACCCAGACGAAGCGCGTCGGCAACAGATTTACGGCAACTTGCGGATGA TGGTGTCGATCAACCGCGACGGTTCGCTGTACGAAGTGCTGGTACTGGAATCGTCCGGGCAGCAGGTGCTGGACCAGGCGGCGCAACGCATCGTGCGGCT GGCAGCGCCGTTTGCACCGTTTACCGGGGATCTGGCCGAGTTTGACCGGCTGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGC AACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTTACTGCCTGTAGTGGCCCATTCGCGGGCACGCCCGCTCCCACAGGATCTTCATTGAATCTGAAGCCTGCGGGGTACCTGTTGGAGCGGGCATGCCCGC GAAGAGGCCCCTACAATCGACACAAATCCGCACCTTGTCAGCCTCGCCGCCTGGCGCCACACTATCCCCATGAAAACCCTCGCCCCGAGCTACCTCAAGC ACCAGTTCCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTACATTGTCGAGCACAATGAACATGGCGCCATGGGCCTGGT GGTCAACCGGCCGCAGGAACTGAGCCTGGCCGATATCCTCGAGCAGCTGCGCCCGGACGAAACGCCGCCGGCCAGCACCTTGCAGGTGCCGATCTACCAG GGTGGCCCAGTACAGACCGACCGCGGCTTCGTGCTGCACAGCAGCGAATGCAGCTTCCAGGCCACCGTGGCCCTCGAAGGCCTGTCGCTGACCACATCGC
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| Amino Acid Sequence |
>TonB3 protein
MTLPADIPSDLLPPRVRPVDRLGFTLFLAALVHLALILGVGFTVVKPAEIRHTMDITLATFKSEKAPEKADFQAQDNQQGSGTLDKKAVPTTTELAPFQD SKINKITPPPAARPEVVPPPTPQKSAVVTTAPKPQKVEPKPKESKAQPKPAAPAPDFDSSQLSSQIASLEAELSNEQQMYAKRPRIHRLNAASTMRDKGA WYKEEWRKKVERVGNLNYPDEARRQQIYGNLRMMVSINRDGSLYEVLVLESSGQQVLDQAAQRIVRLAAPFAPFTGDLAEFDRLEIIRTWRFARGDRLSS N
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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