Pseudomonas putida NBRC 14164, PP4_36540
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NBRC 14164 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGACCCTGATCTCGATCGTCGACTGCTTCCGCCGGGTGCGGCCGTCGCTGGCCATGCGAGCCGTCACGATCGTTGCGATGACGCTGTCGGTCTGGGTTG TCGCGGCAATGGTCGGAGAGGACCGGTTCAACGTGTTCTATGGAAACGTCCTGGTATTCCTTGCCTACCTGTTCACACCCTGGACGGCCATCAACCTGGT GGACTTCTACCTCGTGCGCAAGGGGTGCTACTCGATCCGCGAACTGTTCAACCCCGCGGGGATTTATGGGCGATGGGGATGGCAAGGCAATGTCGCCTAC CTCGGCGCGCTGGTGGTGATGGTCCCGTTCTTCGTCACGGCGCCCTATACCGGGTGGATCGCACGGCAAATGGGGGATATCGACCTCTCGATGTTTATAG GTCTGGTGGCTGCCAGCGCATTTTATCTTCTTACTTCTCGAACCCTTGATCTGGGCAACGAACGTCGCCTGGTGGAAAAGGAACAACAGGTCAGCGAGCG
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| DNA Sequence for Gene |
>PP4_36540
ATGAACATGAAAACAACCGGCTGGATTTGGGACGAACGCTTTACCACTCACGATACCCGGGCCTGGAGCCTGCCTTGGCAGGAGCCGATCGACCATCCCG AGAAGGGCGATACCAAGCGCCGCTTCGCAAGTCTGGTCACGCGCAGCGGCCTTGAGCAGCAGCTTGTTTCGCTGCCCTTCAGCCCGGCGTCGCAGGCCGA CCTGCTGCGGGTGCACACGCCGGCGTATGTCGATCGGATCCTGAATCCGACCGGCCCGGCCTGGAGCGATGCGGGCGATGGTGAGACGCCTGTGGGGCCT GGTTCGGCGGACGTCGCCAGGCTCGCGGCAGGTGCTGTGATCGCGGCGTGCGAAGCGGTCGTGACGGGTACCGTGAGCAATGCCTACGCACTCATTCGCC CGCCAGGGCACCATGCGGTTGCCGACCAGGGTATGGGTTATTGCATCTTCCACAACACCGCGGTCGGCATCCGCCATCTCCAGCACACTGGCGCGGTGGC ACGTGTCGCGATCATCGATTGGGATGTTCATCATGGCAACGGGACCGAGACCCTCTTCTACGACGACCCGTCGGTGTTGACGATCTCCCTTCACCAGGAC GGTCTCTACCCCATCGGGCGGGGGAAGGTTGACGACATCGGCGCAGGCGCAGGCATCGGCGCCAACCTCAACATCCCGCTTCCGGCAGGATCTGGGCGAG GAGCATACGTGGGTGCGTTCGAGCGTGTGGTCATCCCTGCGATCCGCCGCTTCGGGCCGGACCTCATCGTGATCGCGAGCGGCTTCGACTCGGCGGCAAT GGACCCCTTCGGGCGCCAGCTGCTGCACTCTGAGGCCTATCGTGAGCTGACGACACTGGTGATGCGCCTGGCCGATGAGGTGTGCAAATCGCGGGTTGTG GCCGTACACGAGGGCGGCTACGACCCGCTCATGGGGCCGTTCTGCGGGCTTGCCGTGGTCGAGACTCTTGCCGGGCGACGCACGGCCGTCGAGGACCCTT GGATCGGCACGGTCGTGAACCTGCCGGAGCAAGCCTTGTTGCCCCACCATGACGCGGCAATACGCGCGTGCGAGCCCCTTCTGGCGGGAGTTCCGGCTGG TTGCGAACCTGCCCGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACTGAGCGCAGGTGCCTGAAGTAGGACCAACGGATGTGTCATCACCCCTGCATGAGATCATGCAGGGGTGATGTTCCATAGCGAGGTTCCGCTCCCCAA AATCAAAATGACGCGGCGTGGCATCAGGCGTTGCAACGAGTTCGCCATCGACCCTGGCGAGCACGCCTGCGCCGATGATTTCGCTGACGCTCATGGCCGA CCCTCGGGACATCGAGCCTGGCACTTGACGCGCGATGCTCAGTGCGAACGGATGGACGCCTGGGTACGTATGCTGCGCCTGATGGACAAGCCTGAAGAGA TAGCGGCCCTTGCCCGCGTCTATGAGTGCGAGATTCTGTACCGCGTGTTGCAAGGCCCGCATGGCTGGATGCTGGGGGAGATAGCCGCGCCGGATACAGC CCTGGCGAGGGTAAGCCAGGCTATTCAGTTCATACGCCGTGACTTTGCGCAGGCGATCAGAGTTGAAGAGCTTGCGCAGCGGGCGGCCATGAGTGTTTCG
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| Amino Acid Sequence |
>putative deacetylase
MNMKTTGWIWDERFTTHDTRAWSLPWQEPIDHPEKGDTKRRFASLVTRSGLEQQLVSLPFSPASQADLLRVHTPAYVDRILNPTGPAWSDAGDGETPVGP GSADVARLAAGAVIAACEAVVTGTVSNAYALIRPPGHHAVADQGMGYCIFHNTAVGIRHLQHTGAVARVAIIDWDVHHGNGTETLFYDDPSVLTISLHQD GLYPIGRGKVDDIGAGAGIGANLNIPLPAGSGRGAYVGAFERVVIPAIRRFGPDLIVIASGFDSAAMDPFGRQLLHSEAYRELTTLVMRLADEVCKSRVV AVHEGGYDPLMGPFCGLAVVETLAGRRTAVEDPWIGTVVNLPEQALLPHHDAAIRACEPLLAGVPAGCEPAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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