Pseudomonas putida NBRC 14164, PP4_35180 (clpP)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NBRC 14164 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCAAAGGCCCTGCTGGAAAACGAAGTCAACCGTCTGCGCGTGCAGGCTGTTCAGCAGTTCGGTGGCAACATCAAGCCTGAGCAGCTGCCTGCCGAGCTGT TCACCGAGCAAGCCAAGCGCCGCGTAGTGCTGGGCCTGATCGTGGCCGAAGTGGTCAAGCAGTTCGAACTGAAGCCGGACGACGCCAAGGTTCGCGAGAT GATCGAAGAAATGGCTTCGGCTTACCAGGAGCCTGAGCAGGTCATCGCCTGGTACTACAAGAACGACCAGCAAATGAACGAAGTGCGTTCGGTTGTGCTG GAAGAACAAGTTGTAGATACTGTTCTGCAGAAAGCGACTGTGACCGACAAGTCGGTCTCGTACGAAGAAGCCGTAAAACCAGCCGAGGCACCAGCCGAAG CCGAGTAATACGTTTTCTCTCGTAGGAAACCCCCACAAGCCAGCCTTCGCGCTGGCTTGTGCGTATTCAAGCCATGACTATTTGGGAGTGAGCGCAGGAC
|
|
| DNA Sequence for Gene |
>PP4_35180
|clpP
ATGTCCCGCAATTCTTATATTCAGCAGAGCTCTGACATCCAGGCCGCCGGCGGCCTGGTCCCGATGGTTATCGAGCAGTCCGCCCGTGGCGAACGCGCCT ATGACATCTACTCGCGGCTGTTGAAGGAGCGAGTGATCTTCCTGGTGGGCCCTGTAGAAGACTACATGGCCAACCTGGTAGTGGCGCAGATGCTGTTCCT TGAGGCGGAAAACCCGGACAAGGATATCCATCTTTACATCAACTCCCCAGGCGGCTCGGTGACTGCAGGCATGTCGATCTACGACACCATGCAGTTCATC AAGCCGGACGTCTCGACCATCTGCATCGGCCAGGCCTGCAGCATGGGTGCGTTCCTGTTGACCGCCGGTGCCAAGGGCAAGCGTCACTGCCTGCCTAACT CGCGGGTGATGATTCACCAGCCATTGGGCGGCTTCCAGGGCCAGGCTACCGACATCCAGATTCACGCCCAGGAAATCCTCAGCATCAAGGCGCGTCTCAA CGAGCTGCTGGCCTACCACACCGGCCAGGACCTCGAGACCATCCAGCGTGATACTGAGCGTGACAACTTCATGAGCGCCTCGCGCGCGGCCGAGTACGGC CTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACCGGGGTGTCAGAGCAGGTAGGCGCGGAAAGCGCCTACCTGCGGACTTGAAAAAGCCCGCAATTGCCTTCATCTTGTGTTGCAAGCCTACCGGATTGGA TCGATCGAATGACTGACACCCGTAACGGCGAGGACAGCGGCAAATTGCTCTATTGCTCCTTCTGCGGCAAAAGCCAGCACGAAGTGCGCAAATTGATTGC CGGGCCCTCGGTATTTATCTGCGACGAGTGCGTCGACCTGTGCAACGACATCATCCGTGAGGAGGTGCAGGAAGCCCAGGCCGAGAGCAGCGCGCACAAA TTGCCTTCGCCGAAAGAAATCAGCGGCATCCTGGACCAGTACGTCATTGGTCAGGAGCGCGCGAAGAAGGTGCTGGCCGTAGCGGTATACAACCACTACA AGCGCCTGAACCAGCGTGACAAGAAGGGCGACGAAGTCGAACTGGGCAAGAGCAATATCCTGCTCATCGGGCCGACCGGCTCGGGCAAGACCCTGCTCGC
|
|
| Amino Acid Sequence |
>ATP-dependent Clp protease proteolytic subunit
MSRNSYIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQMLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFI KPDVSTICIGQACSMGAFLLTAGAKGKRHCLPNSRVMIHQPLGGFQGQATDIQIHAQEILSIKARLNELLAYHTGQDLETIQRDTERDNFMSASRAAEYG LIDSVYDKRQLAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|