Pseudomonas putida NBRC 14164, PP4_20090
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NBRC 14164 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCACCGGCCAGCAGCAAACCCACCGCTACGACGCGGTGATTCTCGCCACCGGCTACGAACGCCGCTCGCACCGTGACTTGCTGGCACCGCTGGGCGGTT ACCTGGACGACTTCAGCGTTGACCGCAACTACCGAGTGCTGGCCAGCCCCGACCTGCAGGCCTCGGTGTACCTGCAGGGCTTCTGCGAGAACAGCCACGG CCTGAGCGACACGCTGCTCTCGGTGCTGCCGGCCCGCGCTGCGGAAATTGGCCGTGCGCTGTACCAGGACCTGGCGCAGCTGCACGGCAAACCGCAACCT GCCGTGGCCCTGACCCGCGCCTGACCCCTCTGCAACATCTCTTTTCAAGGCCGGCTGACGCCTCGCGCGCAGGCCGGCCTTGCGCTTAGAAACATTTGCT TGCATTTAAAACGGCAGGTTTTCAATTCTCATTCGTCCTTATCAGTACAGCCCTCTTTGGTTGGGCACACGCTCGACCACCCAATGCAGAAGACCGTCTG
|
|
| DNA Sequence for Gene |
>PP4_20090
ATGGCCAAATCACCGAAAAAATCCAAATCCAGGCTGTGGTTCCTGGTCCATAGCTGGCTCGCCCTGCCGATCTGGTTCTTTGTGCTGATCGTCTGCTTTA CCGGCATGCTCGCCGTGGTCAGCCAGGAGATCGTCTGGCTTGCCAACTCCGATGTGCGTGCCAGCAAGCCCTACGCCGACGCCGAGCGCCTCAGCTTCCA GCAGGTACTGGACGCCATGCACAAAGCCGATCCGGACATGGTCGTGGAGTCGCTCAGACAACCCGACGGCTCTCACTTTGCCCTCACGGCGGATGTGACA TTGCCAGACGGCACCAGCCCGACGCTGTACGTCAACCCGTACACCGGCGCCATCCAGGGCAAATCCCCCGACTTCAACTTCGAAGGCTTCACCCGCGCCC TGCACGGCTGGTGGCTGGTGCCCTTCACCAACGGTTTCAGCTGGGGCTGGTACCTGGTGTCGATTCTCGGCTTGCCCATGCTGGCATCGTTGGTAACCGG GCTGGTGGTGTACAAGAAGTTCTGGAAGGGCTTCTTCAAACCGGTACGCACGGGGCATGGCTCGCGCATCTTCTGGGGCGACTTGCATCGCCTTGCGGGC GTCTGGTCGATCTGGTTCATTGCGGTCATTTCCATTACCGGTACCTGGTTCCTGATCCAGGCAATCCTGTTCGACAACCACATCACCATTTCCAGCCGGC CCATCGTGCCGGTGATCGCCCGCGAAGATGTGCCACAAACACCCGATGGCAGCCCTGCCCCGCGCATCGACCTGGATGAGGCAGCGCGCATCGCCGGCCT GGCGATCCCGGGCCTGGAAATCAGCTTCATTTCGTTGCCGTCCACCGCTTACAGCCATGTTTCAATGGGCGGGCGTGGTTGGTATCCGCTGATGTTCCAG AGCGCCGACGTCAACCCTTACACGCGCAACGTCGACAGCCAGTTCCTGCTCAGCGACCGCTCGACGCTGGAGTTCGTCACCGAGTCCATGCGCCCCTTGC ACACCGGCGACTTCGGCGGCCTGCCGATCAAGCTGATCTGGTTCTTCTTCGGCCTGGTGCTCACCCTGATGGTGTTCAGCGGCTTGCTGATCTGGACCAA GCGCACCGCGCAGGCCACCGCCGCCGCCCTCAAGCGCAGCGAACGCACACCCCGCGCTGCGCGCGCCCAGACCTCCCTGGAGACCCAACCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCACGCACAGGCCGTGCCCGCCCGCCCACTGAAGCAATGGTGGCTGAAGTGGCGTTTTCACCTGAACATCCTGTTGATCCTGGTGCCGCTGGGCTTCAT GCCCAAGTATTTCAACGACGCAAAGCTGTTCCGTGGCGACGCCGGGCTGGGGGCCAACGTGATCACCGGTATCCAGGCAGGCCCCTATACCCTGGACCTG GCTGAACTGCGTGACGAAGCACCACGCCAAGACGGCCCGGCTGGCAATTTCAAATCCTTCAACGCGGCGCTATGCAAAGCCTGCATCAATGACGTCAAGG CCGTTTACCTGCGCATTGGCAAACCGCGCAGCCTGCGTGCCGCCGGCACGATCTTCTTCGGTGCGCCTTATCGCATGGGCACCAACCTGCCCATCCCGCC CCGCACCAAACCCGACGCACAGATCTGGATCACCCTGGAAGGCTGGGACGGCAGCATGCACCAGGCGTCGGTCCCGCTGGCCAAAGCATCGCCAGCCACC
|
|
| Amino Acid Sequence |
>hypothetical protein
MAKSPKKSKSRLWFLVHSWLALPIWFFVLIVCFTGMLAVVSQEIVWLANSDVRASKPYADAERLSFQQVLDAMHKADPDMVVESLRQPDGSHFALTADVT LPDGTSPTLYVNPYTGAIQGKSPDFNFEGFTRALHGWWLVPFTNGFSWGWYLVSILGLPMLASLVTGLVVYKKFWKGFFKPVRTGHGSRIFWGDLHRLAG VWSIWFIAVISITGTWFLIQAILFDNHITISSRPIVPVIAREDVPQTPDGSPAPRIDLDEAARIAGLAIPGLEISFISLPSTAYSHVSMGGRGWYPLMFQ SADVNPYTRNVDSQFLLSDRSTLEFVTESMRPLHTGDFGGLPIKLIWFFFGLVLTLMVFSGLLIWTKRTAQATAAALKRSERTPRAARAQTSLETQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|