Pseudomonas putida NBRC 14164, PP4_10840
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NBRC 14164 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CACGTCGAGCGCGTAGCCGAAGCGCAGCGCCGTCTGGCAGCCGAGGCCGACGAAGAGCTCGCCCGCCTGGTGGCACTGCAAGCGGTCAACCCAAGCGTGC GCGACAGCGAAATCGACGCCCTGCGCAAGCAGCGTGAAGACGGCCTGGCGATGCTGGACAAGGCCGCCTTGCGCCTGGAGGCCATTCGCGTGCTGGTGGC TGGCTGATCTGACACGCCCGTTGGTGGCCTGACCACCATCTGTAAGAGCAGCCTTGTGCTGCGAAGAGGCCGTATGCCCCACAAGATTATTGTGAGGCGT ACGGCCTCTTCGCAGCACAAGGCTGCTCCTACACGTATATCCCTCTCTTTATGCCTGATGGCGATCGGGTTGATAACCAAATCGTAGAAATCAATATGCC ATTATTCAGGAAGGCTTAAACACCTCTTCCTATACTGCCTCTGGACAGTCTGCACAGGGTTGTAGAGCAGACGAGTGAAAACTCGATCATGGGGCACTCA
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| DNA Sequence for Gene |
>PP4_10840
ATGGAATGGCTGGGGCTGCAACTGTTCGCCGACCTTCCGGCAACCGGGCGCATCGTTATCGATTGCCGCCATGAACCGTTCCTGGTCCTGCTCGCCTACT TCGTTGCCAGCGCGGCTTGCTTCGCGACCCTCGACATGGCCGAACGCCACTCCCACAGCGAAGACCCCACTGCCCACCGACAATGGCACATGCTTGGCGC CTGCTGCCTGGCCGGTGGCATCTGGGCCATGCACTTCATCAGCATGCTGGCCTTCCAGGCGCCGGTGGAGGTGCACTACGACGTTTCCCTTACCATTCTT TCGCTGCTCATCGCCTTGGGCGTCGCCTGGGTGACCATGCACAGCCTCGACCGCAGCCAGATGCGCGCGCATCACTTCCTGCTGAGCGCAGTACTGATCG GCCTGGGCATCATCCTCATGCACTTTGTGGGCATGGCTGCGATGCAAACCGGCGCCCAGCAGTACTACCAGACTGGCCTGTTGCTGGTCTCTGCTGCCCT TGCCCTGCTTACCAGCCTGGCAGCGTTGTGCCTGGCCCGGTACCTGCGCAATGGCAGCGGCACGCTGCACCAGGCCATGAAGTACGGCGCCAGCCTGCTG ATAGCCGGTGGTATCGTCGCCACCCACTTTACCGCCATGTCGGCCATGACCCTGGTGATCCCGGCCGACACCGCACTGCGCCTGCCCTCTGGTGACAACA GCCTGCAACTGGGGCTGGGCATCGGCTTCATCACCCTGCTTATCAGTGGCGCCAGCATCAGCGCCGCACTGGCCGACAAGAAGCTGCAGAGCAAGGAGCA CGACCTGCGCCGGGTCAGCATACTGCTCAGCCAACTGGACCAGGCCCGCGCCTCGCTGCAGCAGGCCGCGCACTACGACGCCCTGACCAATCTGGTAAAC CGCCGTGGCTTCAACCAGGTGTTCGCCGAGCGCCTGGCCGATCACCAGGCCACGGAAAACCGCCTGGCAGTGATGTTCCTCGACATCGACCACTTCAAGC GCATCAATGACAGCCTTGGCCACGACGCTGGCGACGAACTGCTCAAGGTGATCGCCAACCACATCAAGGCCGCCACTCGCAATCAGGACCTGGTTGCACG CCTGGGCGGCGACGAGTTCTGCGTGGTCACCAGCCTCAACAGCTGCGACGAAGCCCGCCACCTGGCACAACGCATCATGCAACGGATGAAAGAGCCCATC GACCTGGGTGGGCGGCGCATGGTCATGACCACCAGCATTGGCGTCAGCATTTTCCCCGATGACGGCAACAGCGCCGAAGAACTGCTCAAGCATGCCGACC TCGCCCTTTATCAGTCCAAGGATAGCGGGCGCAACAGCCTGCACTTTTTCAACCACAACCTGAAAACCCAGGCCTCCTTTGCCCTGCAACTGGAAGAAGA GCTGCGCCTGGCCCTGCTCGAAGAGCGTGGCCTGTGCGTGCATTACCAACCTATCTTCGACATGCACAGCGGGCAGGTGGCCAAGCTCGAAGCCCTGGTG CGCTGGCATCACCCCCAGCACGGCCTGCTGGCGCCCGATCGCTTCATCGGCATTGCCGAAGCCAACGGCCTGATCATCGACCTTGACCTGTGGGTGATGC GCCACGCCTGCGCCGACCTGGCGCACCTGCAGCGCCACGGTTATGGCGACATCAAGGTGACGGTCAATTGCTCAGCCGTAACCCTCAGCCACGATGAACT GCCCAACGAAGTAGAGAAGGCGCTGTTCCACGCCGGGCTCGCGCCCCGGAACCTGGAGCTGGAAGTGACCGAAAACGCCCTGATGGGCGATATCCAGCGT ACCGTCAACCTGCTCAAGCGCGTGCGTGCCCTTGGCGTGGCGCTGTCGATCGACGACTTCGGTACTGGCTACTCGTCACTGGCCTACCTCAAGCGCCTGC CGCTGGACGTGCTGAAGATTGACCGCACCTTCCTGCAAGATGTGCCGGGCAGCCAGAAGGACCGCGAGATCGTCCAGGCGATCATCGTCATGGCGCATAC CCTGCACCTGCAGGTTGTCAGCGAAGGCGTAGAAACCGTCGAACAGCAGGCATTCCTTGAAGCCCATGGCTGCGACTACCTGCAGGGCTACCTGCTGGGC CGCCCGGTACCGCTGGCCGATCTGCGGCCGCTACTGGAGCGGCTGCAGCGCCAAAGCGAGGCAGTCAGCCCTTGTTGCGGTACAGCTCTACAAGGGTCGC CGGATCTTTTTGCAGGTAACCCTGGCTACCGTGCAGGCGCATCAGCTGCGCGGCGAGGCCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGCGTCGCCGAGCCCTGCTCACGAGAAAACCTGACTGCGCCATCGAGGTCCTTGAGCAGCGTGCGCACGTGCCACTTGATTGGCTCGAAGCGGCTTTC GGCCATTTGCGGCGCGAGGATCTGCAGCGGCTTGGAATCGGCAAAGCCACCCGCCAGTGCTTCGGCGATCAGCGTCGCGTCTACCCCGGACTGCTCGGCC AGCGCCACCACTTCGGCGATTACCAGCGCATTGCACGCCACGATCATCTGGTTGCAGGCCTTGGTCACCTGCCCGGCCCCCACAGCCCCCATGTGCGTCA CGCGCTGACCAAGCACCTGCAGCACTGGGCGTGCTCGCTCAAGGTCGGCCGCTTCACCGCCAACCATGATCGCCAAGGTACCGGCCTCGGCACCGGGTGT GCCGCCGGACACCGGGGCATCCAGCCAGGCCATGCCGCACAGTACCGCGAGTTCGGCGGCCATTTCACGGGTGGCGGTGGGTTCCAGGCTGGAGAAATCG
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| Amino Acid Sequence |
>putative GGDEF/EAL domain protein
MEWLGLQLFADLPATGRIVIDCRHEPFLVLLAYFVASAACFATLDMAERHSHSEDPTAHRQWHMLGACCLAGGIWAMHFISMLAFQAPVEVHYDVSLTIL SLLIALGVAWVTMHSLDRSQMRAHHFLLSAVLIGLGIILMHFVGMAAMQTGAQQYYQTGLLLVSAALALLTSLAALCLARYLRNGSGTLHQAMKYGASLL IAGGIVATHFTAMSAMTLVIPADTALRLPSGDNSLQLGLGIGFITLLISGASISAALADKKLQSKEHDLRRVSILLSQLDQARASLQQAAHYDALTNLVN RRGFNQVFAERLADHQATENRLAVMFLDIDHFKRINDSLGHDAGDELLKVIANHIKAATRNQDLVARLGGDEFCVVTSLNSCDEARHLAQRIMQRMKEPI DLGGRRMVMTTSIGVSIFPDDGNSAEELLKHADLALYQSKDSGRNSLHFFNHNLKTQASFALQLEEELRLALLEERGLCVHYQPIFDMHSGQVAKLEALV RWHHPQHGLLAPDRFIGIAEANGLIIDLDLWVMRHACADLAHLQRHGYGDIKVTVNCSAVTLSHDELPNEVEKALFHAGLAPRNLELEVTENALMGDIQR TVNLLKRVRALGVALSIDDFGTGYSSLAYLKRLPLDVLKIDRTFLQDVPGSQKDREIVQAIIVMAHTLHLQVVSEGVETVEQQAFLEAHGCDYLQGYLLG RPVPLADLRPLLERLQRQSEAVSPCCGTALQGSPDLFAGNPGYRAGASAARRGH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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