Pseudomonas putida NBRC 14164, PP4_10140
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NBRC 14164 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGGCCAATCTGGTTTTCACTCGTTCGGCCACAGCCTGCTGATTGGACAGCGCGCGGTGAAAGGTCAACAGTTGATCGACATCGGCCGTTTTCAACCAATC CGCCATCTGGCGGGCAATGAAGGCGTCGACGGAATCGGAAGGAATCGGGATCACGGACACGGCAAGAGCTCCAGAAGATGAAGCAGCAAGCTCAACAGTT GGCCTTGCGCGACGGGTGTTACTTATTGCTGGAGCACCCCGTTCAGAGCCCCCACATTCGTTCGGATAGCCGAACGAAATACCACCCCTCGTTCGGTGAT CCGACAGCAGAAGAATGTTCAAAAACCTGCATACAGGGTTCATGCCCAGGCTTTGCGCGGGGTTATGATCTTTGGCAGGGCTTGGCACGACTCATGCTCT ACACTTGGTAGCCGAATGCACTCGCTTCTTGCTGTATTCGTTGAACGAAAGAGTCCGCCAACGGCTCCATAAAAAAAACAAACACGTCGAGGAAAATTTG
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| DNA Sequence for Gene |
>PP4_10140
ATGCGTATCGTTCGTCAATTGCTGGGCGCCGCCATCGCGGCCGCTGTGATCGCTTCGCCGGCCATGGCCGAAGAACTGACTGGCACCCTGAAGAAGATCA AGGAATCGGGCACCATCACCCTGGGCCACCGCGACTCCTCCATCCCGTTTTCCTACCTGGCCGGCAAACCCGAGCCCGTGGGCTACTCGCATGACATCCA GCTGGCTGTCGTCGACGCCCTGAAGAAGCAACTGGGTACGGACATCAAGGTCCGTTACAACCTGGTCACCTCCCAGACCCGCATCCCGCTGGTGCAGAAC GGCACCGTCGACCTTGAGTGCGGCTCCACCACCAACAACGTCGAGCGCCAGCAACAAGTCGGCTTCTCGGTCGGCATCTTCGAAGTCGGTACCCGCCTGT TGACCAAGGTCAAGGACGGTGCGCCTGCATACAAAGACTTCCCGGACCTGGCCGGCAAGAACGTGGTGACCACCGCCGGTACCACCTCCGAGCGCATCCT CAAGGCGATGAACGCCGACAAGCAGATGAAGATGAACGTGATTTCCGCCAAGGACCACGGTGAAGCCTTCAACATGCTCGAAAGCGGCCGCGCGGTGGCC TTCATGATCGACGACGCGCTGCTGGCCGGTGAAATGGCCAAGGCGCGCAAGCCATCCGACTGGGTCATCACCGGTACCCCGCAATCGTACGAAATCTACG GCTGCATGGTGCGCAAGGAAGATGCTGCGTTCAAGAAAGCGGTCGACGACGCCATCGTGGGCTACTTCAAGTCGGGCGAAGTCAACAAGAGCTACGACAA GTGGTTCAATCAGCCGATCCCGCCAAAAGGCCTGAACCTGCAGTTCCCGATGAGCGACGAGCTGAAAAAGCTGATCGCCGAGCCGACCGACAAGGCTGCG GACGAGAAGAAGTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCTCAGATAGTGGCCTGGTGCTCAACAGCACGAATCAATTCTGCAGGCCACTCATTAGTGTCTAACCTTTCATCCGAGGGCGCCAAACGCCCCCGGATG CTCGAAGGTGCCCGTGAAACAACCGTCTGAGGGGAAATCCCGATGAATTACAACTGGGACTGGGGCGTGTTCTTCAAGTCCACCGGCGTGGGCAGCGAAA CCTATCTGGACTGGTACATCACCGGCCTGGGCTGGACCATCGCCATCGCCATCACCGCCTGGATCATTGCGCTGCTGCTGGGGTCACTCCTCGGTGTCAT GCGTACCGTGCCGAACCGCCTGGTATCGGGCATCGCTACCGCCTACGTGGAACTGTTCCGCAACGTGCCACTGCTAGTGCAGCTGTTCATCTGGTACTTC CTGGTACCGGACCTGCTGCCGGAAGGCTTGCAGGAATGGTTCAAGCAGGACCTCAACCCGACCACCTCGGCGCTGATCAGCGTGGTCGTCTGCCTGGGCC
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| Amino Acid Sequence |
>amino acid ABC transporter substrate-binding protein
MRIVRQLLGAAIAAAVIASPAMAEELTGTLKKIKESGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAVVDALKKQLGTDIKVRYNLVTSQTRIPLVQN GTVDLECGSTTNNVERQQQVGFSVGIFEVGTRLLTKVKDGAPAYKDFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGEAFNMLESGRAVA FMIDDALLAGEMAKARKPSDWVITGTPQSYEIYGCMVRKEDAAFKKAVDDAIVGYFKSGEVNKSYDKWFNQPIPPKGLNLQFPMSDELKKLIAEPTDKAA DEKKS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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