Pseudomonas putida NBRC 14164, PP4_06620
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NBRC 14164 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTTGACCTTGCCCCGATGGCAAGCTTGAGACTCGTTGAAAACCTGAAGGAGGCAACCCCCATGCAAGTGTTCAATGTACAAGGCATGACCTGCGGCCATT GCGTGAAAGCCGTGACCCGCGCGGTGCAGGAGCAGGATGCAGCGGCCAAGGTCGAGATCGACCTGGCAGCCAGGCAGGTACGGGTGCAGAGTGAACTGGG GCAGGAGCAGATCCTTACGGCCATTCGTGATGAAGGTTATCAGGCCGAACTCGCCTGAAGACTTGGCAGTGGGAGACTCACCTGTGGGAGCGGGCGTGCC CGCGAATACGCGTAGCCGGTGCCATCCACCGCGTTGCCTGATTCGCGGGCACGCCCGCCCCCAGAGGGACCACGGCAATTTTCAGGTTTCGAGCCAGGCA GTTGTCCCCGCAAGGCCCAGGTTTGTTGCAAATGTTTTCATACCGATAGTGGCCACAGCAGGTAGAATCAATCACTTGCTTAGCCTGCTATGGATTCCTG
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| DNA Sequence for Gene |
>PP4_06620
ATGAACCTGCGAATGGTGCTCATCCTGGGCGCACTCAGTGCGTTCGGGCCCTTGGCGATCGACTTCTACCTGCCCGCCTTCCCGGCCATGGCGCAGGCGT TCGCCACCGATGAAAAACACATCCAGGCCACTTTGGCCGCCTACTTCCTCGGCCTGTCCATCGGCCAGTTGGCCTATGGCCCGGTAGCCGACCGCTTTGG CCGGCGCATACCGCTGATGTTCGGGGTGACCCTGTTCACCTTGGCGTCGCTGGCCTGTGCCTACGCCCCCAACCTCGACACCCTGGTACTGGCGCGCTTC GTCCAGGCACTGGGCGGTTGTGCCGGCATGGTGCTGTCGCGGGCCATCGTCAGCGACAAGTGCGACCCGGTGGCCTCGGCCAAGGTGTTTTCGCAACTGA TGCTGGTCATGGGCCTGGCGCCGATCCTGGCACCGATGCTGGGCGGGGTGCTGGTGAACCTGGCAGGCTGGCAGTCGATCTTCCTGGCCTTGAGCCTGTT CAGTGCCGGCTGCCTGCTGGCGGTCAGCCTTGGCCTGCCGGAAAGCCTGCCTGAGCACATGCCGCGTCAGCCGCTGTCTGGCGCTTTGCGCCAATACCTG CGTTTGCTTGCAGACCGGGTGTTCCTTGGCCATGCCTTGACCGGTGGTATCGCCATTGCCGGCATGTTTGCCTACATCGCCGGTTCGCCTTTCGTGTTCA TCAAGCTCTATGACGTGCCGGCCGAGCACTACGGGTGGCTGTTCGGTACCAACGCCGCCGGCTTCATCCTGGTGGCACAGGTGAATGCACGTCTACTGGC CAAGCGTGGCCCGGCGTTCCTGCTGGCGCGCGGGGTGTGGGTGTACCTGGCGGCAGGCCTGGCGCTGTTGGGCGTGGCAGCCTTGCAGCCGACACAGTTG TGGCCGCTGCTGGTACCGCTGTTCATCTGCATCGCCAGCCTGGGCTGCATCATCCCCAACGCCTCTGCCTGCGCCATGAGCGGGCAGGGCGCACGCGCTG GCAGCGCCTCGGCACTGATGGGCTGCCTGCAGTTCAGCGTCGCCGCAGGTGCGGCGGCGCTGGTCGGCCTGCTGCATGATGGCAGTGCGGTGCCGATGGC GACGGTGATCAGCTTGTGCGGTGCACTGGCGGTCAGTGTCGCGCTGCTGACCCGACGCTTGCAGGCCAGGCGTCCCGCATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGGTGAGGTGCCTGCAGGCGGGTTTCGAGCGTGGCGACGAAGGCCCGCGCCTCGGCCTCGCTGCGGAAACTGACCACGTGTTGATCGAGCTGGACCTG CCAGGGGCAGGCAGGGTTTCGGCTCGATGCACTGACGACAATTTTCATCGCGGCAAACCTCCAGAAGGGGGAGCCGCTCAAGTGTAGCGCCGCCCCTCGT GGCTGCCACGGGCTGCATCAGTGTCCTGACTGACGGTCGACAGGCGCATTTCCTCTCCCTGTTTCCCGCTTTGGGCGTAATGCCCGCAAACCCGCAGAAC CTTCGCTTCGTTGCGCGCTATTTGCGGAACATGGCTGTGGGCCGTATCTGAAATTGCAGCCGGTCTTTTTTCATCAAGATGTTTCTACGCCGCTGTACGC GTATATCGGACCTTTGGTTGACCGGGTTCCGGGCAGTTTTCCGAGGCTGTTTCACTGTTTGAAGGGTAGGCATACCCAGTGTTTTTTCGCCGCAGGTATG
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| Amino Acid Sequence |
>putative drug resistance transporter
MNLRMVLILGALSAFGPLAIDFYLPAFPAMAQAFATDEKHIQATLAAYFLGLSIGQLAYGPVADRFGRRIPLMFGVTLFTLASLACAYAPNLDTLVLARF VQALGGCAGMVLSRAIVSDKCDPVASAKVFSQLMLVMGLAPILAPMLGGVLVNLAGWQSIFLALSLFSAGCLLAVSLGLPESLPEHMPRQPLSGALRQYL RLLADRVFLGHALTGGIAIAGMFAYIAGSPFVFIKLYDVPAEHYGWLFGTNAAGFILVAQVNARLLAKRGPAFLLARGVWVYLAAGLALLGVAALQPTQL WPLLVPLFICIASLGCIIPNASACAMSGQGARAGSASALMGCLQFSVAAGAAALVGLLHDGSAVPMATVISLCGALAVSVALLTRRLQARRPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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