Pseudomonas putida NBRC 14164, PP4_06450
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NBRC 14164 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGTGGATGGCAGTTGCCCAAGCGCCAAGGCCCGCGACATTGCCTTGTGGCCGGCCCCGCTGGAGCCTTGGCTGCCCCGCGTGGAGCGGCGCGCGGCGC GGCTGCCGGCCATCGACCCGGCCTGCCCACCGCAGGTGCCGGCCAGCGCTCCGCCGTTGTCGATAGTGGGCGTGCGACCGGGTGACAACCTGCGCCGCCC GGCGACCAGCAGCGAGCCGTTGCAGCTGCATGTATCGGCCCTGGGCGGTGGCGGGCGGCGCTGGTGGTTCCTCAATGGCCAGCCGTTGGGCGAAACCCTG GGGCAGGACAGCCTGCTGGTGCGCTTACCGCAGGCCGGGCAGGCCGAGGTCAGTGCGCTGGACGAAAGCGGCGAGACCGCGCGAGTGGCGTTCCAGGTCA GCGAGTAGGCGTTCGACGGCAGCCGGGCCAGCACCTACGCTTGCAAGTGACGGGTGTGACCGGCTGGTGCCCCGCAACCCAAGGGAACATGGAGCGCCCT
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| DNA Sequence for Gene |
>PP4_06450
ATGCGTCCTCTGGCCGTGCCCCTGTTGTTGCTGCCTTGGGCGTTTTTGGCCCATGCCGAGTCGTTGCCGGGTTTTCTCGACAGCCATGAGTATGAACGGC GCTTGCCCGACACCAACCTGCCGGTAGACGCCTATCGGCCCGCCAGCCCCAATCTGCGAATGCCCCGGCCAAACGCCGAAAGCCAGGCCTGGGCACCTGC GGATACGCGCATGGTGCTGCACAAGGTGCGTTTCGAAGGCGGTACGGTGTTCCCCTTGAGCGACTTGCGCGAGCACTACCAGCCGTTGATCGGGCACAGC ATCACATTAGGCGAGCTGCAGCAGTACACCGAGCGCCTGACCGAGCGCTACCGGCAGGACGGTTACCTGCTTTCCTACGCCTACCTGCCACCTCAGGATG TGGCCGAAGGCCGGGTGAATGTGGTGCTGGTCGAAGGTTACATCCGGGATTACCGCGTGGAGGGCGACATCGGCCCGGCGGGTGGCTATTTGCAGCAGCT GCTGACGCAACTGGAAGCCGAACGCCCGCTGACACGTGAAACCCTGGAGCGCTACCTGGGGCTCGCCGAACGCCTGCCGGGTGTGTCGATTGAGGCTGAG CTGGCGATGGCGCAAACCGCTGACGGTGCCGCCCGCTTGACCGTGCGTGCGCAGCGCAAGCCGTTCAGTGCCGCTGTTACCCTGGCCGATTCCAGTCGCG ACGATGCGCAGGCACTGCTGACGGCCACCAGCAATGCCCAGACCCGCTTTGCCGAACAGTTCAAGGCGAGCCTGCTGCTGCCTCCGGGGGATGACCAGGT GCATTACCAGCGGCTGGACTACAGCCAGTACCTGGACGCTGCCGGCAGCCAGTTGCTGCTGTCGGCTTCGCGCTACCGCAGTGATCCGGGCACGCGCATA CGCCTGGATGATGGCCGTGACATGACCCGCGAGCGGGACAGTGAACGCTATGCAGTGGGCCTGCGCCAGCCAGTGGTTGTCAGGCCGAACGAATGGATGG CGGTGCAGGGGCACCTGTATGCGGTCAGCGAGCACGTCGAAGACCAACTGGACGGGGAGCCTTCACTACGGGACTACGACACTTCCGTGCGCGCGCTGTC CTTCGAGGGCGACTGGCGCAAAGTGGAAGGTGGCCGCCTGCGTATTGTCAGTGCCGGGGTTTACCAGGGGCTGGATTACCTGGGCGCGCGTAGCGATGCT GACTACGATCTGGATTTCCTGCGGTTGCGGCTTTCCGGACTGCAGAGTGACACGCTGGCTGGCAACTGGCAGGGGGTGGCGTCGGGCGCGTTGTACTGGA GTGATGACCGGCTGCCCGACAGCGAACGGGCGGGCTTTGGTGGGCTGCATTTTGGCCGTGGCTACCCGCGTGATCAGGCGGACGGGGACAAGGGGTGGGG TGTGGCTTACGAACTGAACTACAGCCTGCGAGGTAACGGGCTGGCGCTGGTTCAGCCCTATGCGGCAGTGGATGTGGCGCAGGCCTGGCATAACCGGGGG CCTGTGGACGATGCCCACCTGGCTTCCGCGGCACTTGGCGTACGGTTGGGGGATGGGCGCTACCTCAACGTTGCGCTGGAGGTGGCGAAGCCTTTGGCGG ATGTGGCGTTGGATAGCCTGGACCGTGGCCCCCGGCTAATCCTGAGTTTGGGTTTTCAAATGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGGCTGCAAAGCAGCCCCGGCAATCTCCAGCCAAACCCCTCAATGGGTAGTAAACCTCAGATGCACCGGCGACGAGCTGGGCGTCAGCGCCAATGCCAG CTGGGTACGGTTGTGCATGTGGGTCAATCGCAACACTTGCGACACATACAGCTTGACGGTGTTTTCGGTAATGCCCAGCTCACAGGCGATCTGGTAATTG GTCTTGCCCTTGCTCACCAGCCGCGCCACTTCCAGTTGGCGTGGCGACAGCTTCTCGAAGGCAGCTGGCAGCTCGCTTTCGCTCTCTTCCACATCGGTGG CACGGCGGTGGGTACCTTGGCCACGGGCTTTTTCCAGGTCCTGGTACAGTTCGTCCACCGAGTCGGCCAGGTCCTGCAAGCGCTGGTTCAACCCGCCAAG GGCGCGGAAGTTGCGCTGGCGTTCTTGCAGGGCCTCTTCCTGGCGGCGCACGCCCTCCAGCAGTTCGTCGAGGTTCATGGGCTTCTGGTAATAATCGGCA
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| Amino Acid Sequence |
>hypothetical protein
MRPLAVPLLLLPWAFLAHAESLPGFLDSHEYERRLPDTNLPVDAYRPASPNLRMPRPNAESQAWAPADTRMVLHKVRFEGGTVFPLSDLREHYQPLIGHS ITLGELQQYTERLTERYRQDGYLLSYAYLPPQDVAEGRVNVVLVEGYIRDYRVEGDIGPAGGYLQQLLTQLEAERPLTRETLERYLGLAERLPGVSIEAE LAMAQTADGAARLTVRAQRKPFSAAVTLADSSRDDAQALLTATSNAQTRFAEQFKASLLLPPGDDQVHYQRLDYSQYLDAAGSQLLLSASRYRSDPGTRI RLDDGRDMTRERDSERYAVGLRQPVVVRPNEWMAVQGHLYAVSEHVEDQLDGEPSLRDYDTSVRALSFEGDWRKVEGGRLRIVSAGVYQGLDYLGARSDA DYDLDFLRLRLSGLQSDTLAGNWQGVASGALYWSDDRLPDSERAGFGGLHFGRGYPRDQADGDKGWGVAYELNYSLRGNGLALVQPYAAVDVAQAWHNRG PVDDAHLASAALGVRLGDGRYLNVALEVAKPLADVALDSLDRGPRLILSLGFQM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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