Pseudomonas putida NBRC 14164, PP4_06040
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NBRC 14164 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACAATGCGAAGCAGGCCTTACCTATGAGGCCATGGCTGACGATCTGGACGTACTGCTCACAAGCAAAGAGACGGTAAGCGACATCGAGGCACTCGTCGCC GCGCTTGGTCGCCTCGGTGTACACCTTCTCTTCGTACGACCATACCGGACAAGGCGAACGCGCAACCCGCATATTGGAAGGCGCACTCTGCGCAATTGTA GTTCACTATATTACCCTCCACAGCGAGCGTTGATCGTTATGTCCGGCGGCAGTGGTCAAATGAACGTTTGTAACTTCCGTGGACAGGTTGGACTTGATTG GTGAATCTAGCTGGGCCACGCCAGTTACTGAAGTGAGTGGCGGGGACGTTCGGCGTAAGTGACAGCGGCACTGTATAGGTAGCTGCTGCAATGGCGGGCT AGGAGAGGGAGATGAACGTGATGCGCTGTGCTTGCGGTGACGAACAGAGCTCTGGGGTGCTTCGACATCATCACTTTTACGCACTTCGAAGGAAGTCAGA
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| DNA Sequence for Gene |
>PP4_06040
ATGACGTTACGTACTAAGCTGCTCTGGCAGTTCGCGCCGCCTCTATTGTTGGTGCTGGGCCTGACTTTCTTCGCGACGCATAATGTGTTGCTCGAACGGC TGGACAAGCAAGACGAGCGCCTGTTGGTTAGCGAGGCGAAGCGTGTGCGTGCTTTGCTGAACAACCTGTTTGAGCGCGATGCCGATCGCTTGGAGCAACT TGCCGAGTCGCTGCCTCGCCCCATCGCGTCGGCATTCCCTTTGCCATCCCACATTCTTAACCGTACAGATTTCGATTTTCTCGCGTTGGTTACGCCCACA GGGCAGCGATCGGCCTGGAGAACGATGGCCCCAGTGTTCAGTGATACCGGTAACAGCAAGCCATTGTCATTCGAATCACTGCAGAGTGAGGTTTCGAGTC AGCTCGGTCGCTTGTCTAGCTCCATGGCTTCGGCATCCTCTCCTCAGCTCATGGTTGTACATCGTCAGCCTTTCATTCTGGCAACGGTGGATGTCGGCCC CCCCAGTGCACGGGAAACTCTGTTTGCGGGGCGTTTTCTCGATGCCGAGCGAAATGACGGACTGGAACGGCAACTGGGCGCAGTGCTGCAATGGGAAACT GGGGGCGTCCAGTCTGTTGCTTCGCCAGCGGATGGCGAGTTCATCAGTATCGGCAACCGCCAGATCAGCGACGAGCGCCACCAGCGTATCGATTTGATAT TTCATAACAGCTTGGGCGAGCCGCAAGTGCAGTTGCAGTTGCACCGGGAACGGCATCTCTACAGCGAGGGCATCCAGCAACTCAAACTGTTGATGGGTGC TATGTTTGCAATCATCAGCCTTGCCTGGTTGGTTATCTACCTCGCCTTGGATGTCACGCTGCTCCGACGGATTTCTGCTCTGAATCGGGAGTTTCTGGCT GTAGGAGCTGATTCAGCGAGCGGGCGTTTGTCCGACTCAGGGCATGATGAGTTGGGCATGTTGGCGCAGGAGGCTAACCGCACCCTGGACCGCCTTGAAC AGAGCGAGGCTCGTGGACGGATCATTCTCGACGGTATGGAAGATGGATACTTCGAACTCGACTCACACGCCCGCATCCAATCGATGAACCCTGCCTTCTG CAAAATGCTCTGCTACAGCGCTGCGGATGTCACAGGTAACACATTCGCTGCGCTGCAGCCGCAGGAACACGGTAGCAGGCCGAGTTCGCGAGTGGTGTTC GACACCGAACCAGGCGCGCCGCTTTCCGCTCGGTTACAGCGTGCGGATGGAACGGTAGGCTACTACGAAACGCGATTTACCAGGATCACCGATGCAGCAG GCAATGTGATCGGCTATCGCGGCATCTTGCATGACGTCAGTGAGCACGTTCAGTACCAACAAGCGTTGCTGGACATGGCCTACCGTGATGCACTGACCGG TCTTGGCAATCGCAAGGCTTTCCATGAGCAACTTGAGCGCTTGCTGGATGCGCAGCGCTTGCCGCTAGGGGTGGTGTTTCTTGATCTGGACCGCTTCAAG CAAGTCAACGACCGTTTTGGCCATGATGTCGGCGATGCTTTGCTGGTGTGCATGGCCGAGCGTCTGCGCAATGCCATGCGCAAGCAGGATACGGCCTATC GTTTGGGCGGCGATGAGTTCACGGCGATCTTGCCGGCAATCGACGAGGCGGCGGCAGGCGCCTTGGCCGAGCGGCTATTGGCCGTGTTGAGTGCACCGGT CCGTGTGGGGGGGAAGTTGATCGATTTCGTCACGCCGAGTATCGGTCTTGCGTTCGCGCCTGCGCATGCCTCCAGTGCGAACATGCTGGTGAAGGCGGCA GACCAGGCAATGTATCAGGCCAAACAACAGCGGGGGCGAGTATGCTTGGCGAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAGTCTGCGACGACTGGAGCATCCCTTCTTGCAGGGGGAATCAACTGGTCGGTGTCATCGGTTCAGGTGCGGTTCGTTCATCCACTAATCTTGAAATGGA GTAGTGGCTAGCTGGTTGTTCAATCAACGAACGACCGAAATGGGTCGGTTAGCGCCTTTGGGTCGAGCTGACCATCCTTGTCCTCCCTCGCATGGAGGAC AAGCCATGAATACCATGTCTACCAGCAGCCATCAGCCTCGGAACAAAGGAAAATTGATCGGGCAAAAAGCTCCGCTCCGATTGAAAGATGTCTGGGTCAT TCGGGTAAGGCTTCAAATCGCGGAGGAAACCCGTGATCTGGCTATCCACAGCAAGTGGTCAATCCCTAATCTCAGCATTGACAGTCCGTGGATGTTGAGT GATCTGACGAGAGCACAGCAGCTGTGCGCTTATAACTGTCAGTCTGCAAGGAAGCATCAAGAAAGCCATTCTTGAAGCATCGAGAAATGTAAAAAAGAGC
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| Amino Acid Sequence |
>putative sensory box protein
MTLRTKLLWQFAPPLLLVLGLTFFATHNVLLERLDKQDERLLVSEAKRVRALLNNLFERDADRLEQLAESLPRPIASAFPLPSHILNRTDFDFLALVTPT GQRSAWRTMAPVFSDTGNSKPLSFESLQSEVSSQLGRLSSSMASASSPQLMVVHRQPFILATVDVGPPSARETLFAGRFLDAERNDGLERQLGAVLQWET GGVQSVASPADGEFISIGNRQISDERHQRIDLIFHNSLGEPQVQLQLHRERHLYSEGIQQLKLLMGAMFAIISLAWLVIYLALDVTLLRRISALNREFLA VGADSASGRLSDSGHDELGMLAQEANRTLDRLEQSEARGRIILDGMEDGYFELDSHARIQSMNPAFCKMLCYSAADVTGNTFAALQPQEHGSRPSSRVVF DTEPGAPLSARLQRADGTVGYYETRFTRITDAAGNVIGYRGILHDVSEHVQYQQALLDMAYRDALTGLGNRKAFHEQLERLLDAQRLPLGVVFLDLDRFK QVNDRFGHDVGDALLVCMAERLRNAMRKQDTAYRLGGDEFTAILPAIDEAAAGALAERLLAVLSAPVRVGGKLIDFVTPSIGLAFAPAHASSANMLVKAA DQAMYQAKQQRGRVCLAN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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