Pseudomonas putida NBRC 14164, PP4_03830

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NBRC 14164 DNA, complete genome. [Details]
DNA Sequence Upstream of Gene
ATGCTAAACCCCGACACGGTGCTGCGCGAGGCCGGGCTGGATGACTGGGTGGCGCGGTTTGGTTTGCAGGTGGAAGAGCGCCACCATGCCAGTGCCGATG CCCAGGTGACCGCAGAGCTGGCGCTGATACTGTTCAGCCAGGCCCGGCGCCAGCAGCTGGACAGCCCGTTGCAACTGGAGCAGCGGTTGCGTGGGTGGCG GCGGCGCAAAGCACAGAGTCATGGCCTGTAGCTTTGCATTGGCCTGACTGGCCCAATCCCCGGCAAGCCAGCTCCCACGGTACTGCACAACCCCTGAAAA GTACTCGACACCTGCTCCACAGGGCTGCACAAGGCTTGAAAATCATACGATCCCTGTGGGAGCTGGCTTGCCGGCGATTGGGCCATCAGCCTTTTCCATG GTGGCAATCCGATAAGCGTCCATTGCACCCACCCCCTCCCCTCTGCAACAATCGCGAATAATTATCGTTAGTTAATGCATTCGTTCCGGGGGGACGCTGC
DNA Sequence for Gene
>PP4_03830
TTGTCTTCAGCACAGAGCCCACACGCCGATCTGGTCGGTGCGCTGTACCGCGACCACCGCGGCTGGCTGCTCGCCTGGCTGCAACGCAGCATGGCCTGCC GCCAACGTGCCGAAGACCTGAGCCAGGACACCTTCGTGCGCCTGCTCGGCCGTGAGCAGCTGGACACGCCCCGCGAACCCCGTGCGTTTCTGGCCGCCGT GGCCAAAGGGCTGATGTTCGACCACTTTCGCCGCGCCGCGCTGGAACAGGCCTATTTGGCCGAGCTGGCGCTGATCCCGGAAGCCGAACAACCTTCCCCG GAAGTGCAGCTGCTGATCCTCGAAGACCTCAAGGCCATCGACCGGCTGCTCGGCAAGCTGTCGAGCAAGGCCCGGGCGGCATTCCTGCACAACCGCCTGG ACGGCATGGGCCATGGCGAAATCGCCGAGCGCCTGGGTGTGTCGGTGTCGCGGGTGCGCCAGTACATCGCCCAAGGCATGCGCCAGTGCTATGTGGCCCT GTACGGGGAACCGACGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAACGCACCGGTTTCGTCCCAGGTACTGGAAGCTGCCATCGCCTGGAAACTCAGCCTCGGCGACGCCAGCGGCACGCCCGATGAACGCAACGAATTCAT GCGCTGGCATGCCGCCAGCGAAGAACACGCGCGTGCCTGGCGCCAGCTCGGCGCCATGGACCAGCGCGTCAGCGCCGCGGCCGGCCCGGCACGCCAGGCG TTGCTGCAATCACGCACCAGCCTGCGTCGACGCATCGGCAATGTGGGCGGCGGGCTTGCTGGCATGTTCCTGCTCGGGTCGCTGCTAGCCTGGGTCGGCG CACCGTCGCTGGCCCCAAGCTACTGGCTGGCCGACCAGCGTACCGCTACCGGCGAGCTGCGTACCCTGCGCCTGGAAGACGGCACACTGCTGAGCCTGAA CACCCACACCGCCGTAGACATCGACTACGCCGGCGAGCAGCGGGTAATCGTGCTGCACCAGGGCGAGATCTCGGTCGAAACCGGCCACCAGGACCCGCGC
Amino Acid Sequence
>putative RNA polymerase ECF-type sigma factor
MSSAQSPHADLVGALYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAAVAKGLMFDHFRRAALEQAYLAELALIPEAEQPSP EVQLLILEDLKAIDRLLGKLSSKARAAFLHNRLDGMGHGEIAERLGVSVSRVRQYIAQGMRQCYVALYGEPT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site