Pseudomonas putida NBRC 14164, PP4_01210
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 486 | 639 | 1.02E-49 |
| Coils | Coil | Coil | - | - | 421 | 441 | - |
| Coils | Coil | Coil | - | - | 446 | 480 | - |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 484 | 638 | 1.65358E-64 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 174 | 212 | - |
| Coils | Coil | Coil | - | - | 5 | 25 | - |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 470 | 640 | 1.8E-58 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 340 | 639 | 7.5E-68 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 481 | 637 | 1.4E-46 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 470 | 641 | 2.0E-59 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 479 | 639 | 1.1E-47 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 475 | 641 | 1.7E-51 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.