Pseudomonas putida NBRC 14164, PP4_00010 (dnaA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NBRC 14164 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AAGCTTTTCTGAAGAACTTATAGATATTAGGTGGATAACCTTCTGTGGATAACCTTCTGTAGGCCTCAAAATTCGCCATGTACAGAGTTTTGAAACTTTG TTCTAAACCGGTGCTGCGCTTGTTTTCATCGTGGTCGAAAGCTGTGGATTAAAATGGCACTTACCCACAGCAGAGTTATCAACAGACTACGACCCAGGGT TGTGCATAGCACTCATGGTCGCTTATCCACAGGGCTTATGCGCAGTGCGACGAAGACGTTTTGGTCGATAAATGGCTGTTTTGTCATGGTTCCTAACGTG TCCACATGTGGATAACTGAACGCTCGACCGGTACAATGGCGGATTGTTTTTGCCTCATCCGGCTTTCAAACTCAGGGGATATCC
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| DNA Sequence for Gene |
>PP4_00010
|dnaA
GTGTCAGTGGAACTTTGGCAGCAGTGCGTGGAGCTTCTGCGCGATGAACTGCCTGCCCAGCAATTCAACACCTGGATCCGTCCGCTACAGGTCGAAGCCG AAGGCGACGAGTTGCGCGTCTATGCGCCTAACCGTTTCGTTCTCGATTGGGTCAATGAAAAGTACCTGGGTCGCTTGCTCGAGCTGTTGGGTGAAAACGG CAGCGGAATTGCGCCTGCCCTTTCCTTATTAATAGGCAGCCGTCGCAGCTCGGCTCCACGGGCTGCGCCCAACGCGCCAGTCAGCGCTGCCGTGGCGGCC TCGCTGGCGCAGACCCGGGCGCAGACCCAAGCTCAAAGGCCTTTGCCGGTAGCGGCCGCAGCCGAGCCTGCGGCTGTAGCAGCGGTAGAACCTGTGCTGG TCAATGAATTGGCCGAGCCGTCGTCGCGTGACAGCTTCGATGCCATGGCCGAGCCCGTCTCGCCGCCAGCCAGCAACAACCGGACCGAACAGCGCACTGT GCAGGTGGAAGGTGCGCTCAAGCACACCAGCTACCTGAACCGCACCTTCACTTTCGACACTTTCGTGGAAGGTAAGTCGAACCAGTTGGCGCGCGCGGCT GCCTGGCAGGTGGCCGATAACCCCAAGCATGGCTACAACCCGCTGTTCCTGTATGGCGGCGTGGGCCTGGGTAAAACCCACCTTATGCATGCTGTGGGTA ACCATCTGCTGAAGAAGAACCCGAACGCCAAGGTCGTGTACCTGCACTCGGAGCGCTTCGTCGCAGACATGGTCAAGGCGCTGCAGCTCAACGCCATCAA CGAATTCAAGCGCTTCTACCGTTCGGTGGATGCGTTGCTGATCGACGATATCCAGTTCTTTGCCCGCAAAGAGCGCTCGCAGGAAGAGTTTTTCCACACC TTCAACGCCCTGCTTGAGGGCGGCCAGCAGGTAATTCTCACCTCTGACCGTTACCCCAAGGAGATCGAAGGCCTGGAAGAGCGCCTGAAGTCGCGCTTTG GTTGGGGCCTGACGGTGGCTGTAGAGCCACCAGAGCTGGAAACCCGCGTAGCGATCCTGATGAAGAAGGCCGACCAGGCCAAGGTCGAGCTGCCACATGA TGCGGCCTTCTTCATTGCCCAGCGCATTCGCTCCAACGTACGTGAGCTGGAAGGTGCGCTGAAGCGGGTGATTGCCCACTCGCACTTCATGGGCCGCGAC ATCACCATCGAGCTGATCCGTGAGTCGCTGAAAGACTTGCTGGCGCTGCAAGATAAACTGGTGAGTGTGGATAACATTCAGCGAACCGTCGCCGAGTACT ACAAGATCAAGATCTCTGATCTGTTGTCCAAGCGTCGTTCGCGTTCTGTCGCGCGTCCACGTCAGGTGGCCATGGCCCTGTCCAAGGAGCTGACCAACCA CAGTCTGCCGGAAATCGGTGACATGTTCGGTGGTCGCGACCACACGACCGTGCTACACGCCTGCCGCAAGATCAACGAATTGAAGGAATCCGACGCGGAC ATCCGCGAGGACTACAAGAACCTGCTGCGGACGCTGACGACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGGCCGTCTGCGCAGCTAATTGAAGGCAAGGGACTAGACCATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCCGGTGTC GTAGAGCGCCGTCAGACCTTGCCGGTCCTGTCCAACGTATTGCTGGTCGTACAAGGCCAGCAACTGTCGTTGACCGGTACCGACCTGGAAGTCGAACTGG TAGGCCGCGTACAGCTGGAAGAGCCGGCCGAGCCTGGCGAAATCACCGTGCCGGCGCGCAAGCTGATGGACATTTGTAAGAGCCTGCCGAACGACGCCCT GATCGATATCAAGGTCGACGAGCAGAAACTGTTGGTGAAGGCCGGCCGCAGCCGCTTCACCCTGTCGACCCTGCCAGCCAATGACTTCCCGACTGTGGAA GAAGGCCCGGGTTCGCTGACCTGCAACCTGGAACAAAGCAAGCTGCGCCGTCTGATCGAGCGCACCAGCTTCGCCATGGCCCAGCAGGATGTGCGCTACT
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| Amino Acid Sequence |
>chromosomal replication initiator protein DnaA
MSVELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRLLELLGENGSGIAPALSLLIGSRRSSAPRAAPNAPVSAAVAA SLAQTRAQTQAQRPLPVAAAAEPAAVAAVEPVLVNELAEPSSRDSFDAMAEPVSPPASNNRTEQRTVQVEGALKHTSYLNRTFTFDTFVEGKSNQLARAA AWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHT FNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRD ITIELIRESLKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDMFGGRDHTTVLHACRKINELKESDAD IREDYKNLLRTLTT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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