Pseudomonas aeruginosa MRSN18971, CH80_RS27610
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain MRSN18971 scaffold00010, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGGAAGCGCGGCATGAGGCCGAGCACTGGCAGGTCAACCTCAACGACCTGGACGCCCTGCACCATGCTGTCGGCCAGGCCCAGGGTCTGCATTGTCCC AGGGACCAGGCCGTGCCAGCTACTTCGGCTGAGCCGCTCGGGCTGCACGTGCTGGTTGCCGAGGACAATGTCATCAACCAATTGATACTGCGCGACCAGC TCACAGAGCTCGGTTGCAACGTGACCTTGGCCAGTAACGGTGAGCAGGCACTGCAAGCCTGGCAGCGCAAGCATTTCGACCTGCTGCTGACCGACGTCAA CATGCCCGGCATTAACGGCTACGAACTAGCCAGGACCCTGCGCCGGCAAGGCTGCACCCGCCCCATCATCGGCGCCACCGCCAATGCCCTGCGCGGCGAG GAAGAACTGTGCCTGGCCGCCGGTATGGATCGCTGCCTGGTTAAGCCCTTCAACCTGCAAGTCCTGCTCAACTGCCTAGCTCCGTATCGAGGTAGCCGTT
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| DNA Sequence for Gene |
>CH80_RS27610
TTGAAGACCTTTAACATCCTGATTGTCGAAGACCACCCGTTCCAGCACATGTACCTGCAACACCTGTTCAGCGAACTTGGCAGCTTCAACCTGGAAGCGG CTCGGGATGGTCAGGAAGCGCTGGAGCGCCTGCACCAGTGTGAGTTCGACCTGGTTCTGACCGACCTGTTGATGCCCGGCATGGACGGCGTACAGTTCAT TCAGCACCTCGCCGGTCTGCGCCACAAGCCAGGCCTGGCGATCATGAGCGCGGCCTCGCGGCGCATGCTAATGGCGGCGAGCCTGGTAGCCAAGAACCTC GGTGTGGAGGTGCTCGGACTGATATCCAAGCCGGTCGAGCCTGTTGCGCTGCGCAGCCTAATCGATCAACTGCAGCTGCACTATCAGGCACCGACCCAAG CGGCACCTGTTACGACGGAATTCGACCGCCAGACCCTAATCGATGCCTTGAACAACCATGCCTTCCAGGCCTGGTTCCAACCCAAGAAGTCCTTGCATAA TGGTCGCATCGTCGCGGCCGAGGCCCTGGTGCGCTGGTTGCACCCGGAGCAAGGAGTGTTGCTGCCAGGCACCTTCCTGCCGACGATCAATGCCTTCGGT CTGGAGGAAAGGCTGCTGTGGGTGATGCTCCAGCAGGCCGTGGATGCTCAGGCGCGGTGGCGTGAACAGGGCTATGACATACCGGTCTCGATCAACCTGC CAACCCATCTGCTAAACAGCCATGACTTGGCCGACCGGCTGCTGGAATTCGTACTGCACCACCAAGGCATACCCAGCAAGCTCTGCTTCGAGCTGATGGA GTGCTCCATTCCCGAGGAGCTGAGCAACTTCTATGCAGGTGCCTGCCGATTGCGCATGAAAGGTTTTGGCCTTTCCCAGGACGACTTCGGTAAAGGCTAC AGCTCCTACATGAGCCTGGTATCGACGCCCTTCACCGAACTGAAGATCGACCGAGCGCTAGTGCAACGTTGCAATGAAAGCGAGAGTCTGACCTCAGCTC TAGTCAGTATCGTCGCCCTGGGTCGCAAGCTCGGGCTCACTGTAGTGGCCGAAGGGGTCGAGACGCCCCAGGAGCTCGAGATACTGCGTAAGGTCGACTG CAACCAGGTGCAGGGCTTTTTGATCTCCCATGCCGTGTCGGCGGAACAATTCAAGCGCCTGCTACACAGCGACGGCCCGCCGTTGGCCTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGCTGTATCTCACGGCGCTGGCCGGGCATCCAAGGTATTATTCACTGAGTATTGATGCCACTACGGCCTTTCCGGATCCTTGCATGAAACAGTACAAC GCTCTGCTGGAAAACCTGGCCCGCAGCTCTCTGCGCCTGAACAAAGGCATGACAGTACTGCTGGGCCTGGCGCTGCTGCTGGCCGGTTTCAGCTTCTGGT CGATCGAGCGCCTGCTCGACGAAAACAGCGACACGATCAGCATCCATTTCGCCCGGCTGATGGAGAATATCCAGGAGCAGGAAACCTTCCTCAAGGCCCT AGTGCAACGCAGCGCCAAGGGGGAGCTGTTCAACTATCCACGCGCGCTCGAACCGATCCTGGAACCGCTACCCGAAGAAGGGCCGAATATCTACAAGGGC CAAGTCTTCCCGTTTTCCATGCCGTTCAGCCTCAATCTCGACCGGCGTAATCTCGCTGACAGCGAAGTGCCGGACATCTTCACCCAAGGGGCGAATCTGG
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| Amino Acid Sequence |
>hypothetical protein
MKTFNILIVEDHPFQHMYLQHLFSELGSFNLEAARDGQEALERLHQCEFDLVLTDLLMPGMDGVQFIQHLAGLRHKPGLAIMSAASRRMLMAASLVAKNL GVEVLGLISKPVEPVALRSLIDQLQLHYQAPTQAAPVTTEFDRQTLIDALNNHAFQAWFQPKKSLHNGRIVAAEALVRWLHPEQGVLLPGTFLPTINAFG LEERLLWVMLQQAVDAQARWREQGYDIPVSINLPTHLLNSHDLADRLLEFVLHHQGIPSKLCFELMECSIPEELSNFYAGACRLRMKGFGLSQDDFGKGY SSYMSLVSTPFTELKIDRALVQRCNESESLTSALVSIVALGRKLGLTVVAEGVETPQELEILRKVDCNQVQGFLISHAVSAEQFKRLLHSDGPPLAY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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