Pseudomonas aeruginosa MRSN18971, CH80_RS03470

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain MRSN18971 scaffold00001, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCGCCATGCTGCCGCTGATGAAGCTCTCCAGCGACGCCTCGATCATCTTTACCTCGAGCAGCGTGGGCCGGAAGGGCCGCGCCTACTGGGGCGCCTATT CGGTATCGAAGTTCGCCACCGAGGGCCTGATGCAGACCCTTGCCGACGAACTCGACGGTACCAGCGCGATCCGCGCCAACAGCGTCAACCCCGGCGCCAC CCGCACCAGTATGCGCGCCCTCGCCTACCCTGGGGAAAACCCGCTGAACAACCCCACCGGCGAGGAGATCATGCCGGTCTACCTGTACCTCATGGGGCCG GACAGCGCCGGCGTCAACGGCCAGGCCTTCGACGCCCAGTGATTCCCCGGCAGCCTCGCCGCCCGGCGAGGCTGCCCTGTCCTTCCCTTCCCTCTTCCCG TCCGGAACTTCCCATTCTTTTTGCATATTTTTCCCACTGAGTGGGAAAGTGGTTTCATTTTCCGGGAAATCGCCTTCACCCTGTGGGTCAAGGAGTTCCC
DNA Sequence for Gene
>CH80_RS03470
ATGTCGAAGCATTCCCCCACCGATCGCCTGCTGCAGATCCTCATTGCCCTCGGCCAGGCTCCCGAAGCCCTGTCTGCCAAGGAGCTGTCGCTGACCCTGG AGCAGCCGCTGAGCAGCACCTACCGGCACCTGAAGACCCTGTTGCGCTGGGGCCTGGCCGAAGAACAGGCCGGCCAGGGCCGCTACCTGCCCGGCCCGGC CTGCCTGCAACTGGCGAAGAAATTCGATCGCGAGGCCTCGCTGATCGGTCTCGCCAAACCAGAACTCAAGCGCCTGGCCGACCTGAGCCAGGAGAGCGTG GCGCTGATGGTGGCCAGCAACCAGCAGGCGATCTGCCTGGAACTGTTCGACAGTCCGCAGCCGCTGCGCTGCTGCTACCAGAAAGGGCTGGCGCAGCCGC TGTTGCATGGCGCCTCGGCCAAAGCCCTGCTGGCGCACCTGGAGGACGAACGGCGCGAGGAGCTGTACCTCGCCCAGGAACTCTCCGCCGAGCGTATCGA CAAGCTGGAGCAGGAACTCCGGCTGATCCGCGAACAGGGCTACGCCGTCAGCCAGGGCGAGATCGACGAAGGCGTCTGGGGCATCAGCGTACCGCTGCTG GACAGCCGCCAGCGCCTGCACGGCGCCCTCAGCCTGATGGCCCCCGCCTTGCGCGCCCAGTCGCGCAGCGAACGCTTGCGGCAATGGACCCTCGACGCCG CCGCGCGACTTTCCGCGCGGCTGGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAACAGGAGTTTCGATGTACCCCGCCCCCGACATGAGCCTCTGGCAAGGCCGGATCGATAGCCAGGAAGGCGCCGACGCGCGGCGCTGGCACCAATGGA TGCGTCCCTACGCAGACGACGCCGAAGCGGCCAGCGTGCTGCTCGGTTTCGCCAGCGACGAAGGCGTGCGCCGCAACCAGGGTCGCCAGGGCGCGCGCCA CGGACCGCCAGCCTTGCGTCGCGCGCTGGCCAACCTGGCCTGGCACGGCGAGCAAGCGATCTACGACGCCGGCGACATCGTCGCCGGCGACGATCTGGAA GCCGCCCAGGAACGCTACGCGCAACGCGTCGCCGACCTGCTCGCGCGCGGCCACCGGGTGGTCGGCCTGGGCGGCGGCCACGAAATCGCCTACGCCAGCT TCGCCGGCCTCGCCCGCCACTTGAGTCGGCATGAGCGCCTGCCGCGCATCGGTATCCTCAATTTCGACGCGCATTTCGACCTGCGCCACGCCGAACGGGC
Amino Acid Sequence
>IclR family transcriptional regulator
MSKHSPTDRLLQILIALGQAPEALSAKELSLTLEQPLSSTYRHLKTLLRWGLAEEQAGQGRYLPGPACLQLAKKFDREASLIGLAKPELKRLADLSQESV ALMVASNQQAICLELFDSPQPLRCCYQKGLAQPLLHGASAKALLAHLEDERREELYLAQELSAERIDKLEQELRLIREQGYAVSQGEIDEGVWGISVPLL DSRQRLHGALSLMAPALRAQSRSERLRQWTLDAAARLSARLD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site