Pseudomonas aeruginosa MRSN18971, CH80_RS01510

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain MRSN18971 scaffold00001, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGGCGAACTGCTGCGGCGCTTGCGGCGCCTCGGCCTGAAGGTCGCCTTCGACAGCAGTGGCGCGGCCCTGCGCGAAGGTGTGAAGGCTGCGCCGTGGATG ATCAAGCCGAACGTCGAGGAACTGGCCGATCTCTGCTCGGCGCCGATGGATGACCTGGTCGCACAGCGCCAGGCGGCCGAACGTCTGCGCCATGACGGGG TAGGCCAGGTGGTGATTTCCCAGGGCGCCGCGGGGGTCAACTGGTTCGCCGCCGAGGGTGCCTGGCAGGCGCGGCCGCCGGCGGTGGAAGTGGCCAGCAC GGTGGGCGCCGGCGATTCCCTGCTGGCCGGCATGCTGCACGGGCTGGCCAGCGGCTGGCCGGCCGAGCGGGTGCTGCGTCAGGCCACCGCCATCGCCAGC CTGGCGGTGACCCAGTTCGAGTTCGGCATCGGCGATCCGCAGCGCCTGGCGCGGATCGAAGCGGGCGTCGTGGTACAGCCATTGGTCGAGGGGGCCTGAG
DNA Sequence for Gene
>CH80_RS01510
ATGAAACTAGCGATCGTCACCGCCTGCCCTGGCGGACAGGTCACCAGCGTGCTCGCCGCGCGCCTGCTGCGGGGCGCCGCCGAGCGCCTGGGCTGGGAAA CCTGCGTCGAGGCGAATGCCGGGTCGAGGCCCGAGGGCGAACTGAGCGCCGAACAGATCGCCGAAGCCGACTGGGTCCTGCTGGTCGGCGTCGAGCCGCT GGCGGCGGCGCGTTTCGTCGGCAAGCCGGTGTATCGCGCGCGTCCCGCCGAGGCGCTGGCCGATCCGCGCGCCTTCCTCCAGCGGGCCGCCGCCCTGGCG AGCGTGGAGGTCGCCGGGGACGAGGCCGGCCTGGTTGCGCCGGAGGCCGGAGCGGCACCGCGGATCGTCGCGGTGACCGCCTGTCCGACCGGCGTGGCGC ACACCTTCATGGCCGCCGAGGCGTTGCAGCTCGCGGCGGGGCAACTGGGCTTCGCGTTGCAGGTCGAGACCCAGGGCTCGGTCGGCGCGCGCAACCCGCT CGACCCGGCGGACATCGCCGCCGCCGACGTGGTCCTGCTGGCCGCCGACATCGACGTGGACACGGCCCGTTTCGCCGGCAAGAAGATCTACCGTTGTGGC ACCGGCGTGGCCCTCAAGCAGGCCCGCGCGACGCTCGAGCGGGCGCTGGCGGAAGGGCAGGTCGAGAGCGCGGGCGCAGCCAGCGCGGTGGTCGCCAGGG ACGAGAAGCGCGGGGTGTACAAGCACCTGCTGACCGGGGTGTCGTTCATGTTGCCGATGGTGGTCGCGGGCGGCCTGCTGATCGCCCTGTCGCTGGCCTT CGGCATCGATGCCTACAAGCAGCCGGGCAGCCTGGCGGCGGTGCTGAGGACGGTCGGCGACACGGCTTTCGTCCTGATGGTGCCGATGCTCGCCGGCTAC ATCGCCTATTCCATCGCCGACCGCCCGGGCCTGGCGCCGGGCATGCTCGGCGGCCTGCTCGCCGGGACCCTCGGCGCCGGGTTCATCGGCGGGATAGTCG CCGGCTTCATCGCCGGCTATGCGGCGCGGGCCATCAGCCACGGGCTGAGGCTGCCGGCGAGCCTGGAAGCGCTGAAGCCGATCCTGGTCATCCCGTTGCT GGCCAGCCTGGTCACCGGCCTGCTGATGCTCTACGTGGTCGGCAAGCCGGTGGCCGGGATGCTCGCGGCCCTGACCGGGTTCCTCGACGGCATGGGCACC TCCAATGCCATCCTCCTCGGCCTGCTGCTCGGCGGGATGATGTGCGTCGACCTCGGCGGACCGGTCAACAAGGCCGCCTACGCCTTTTCCGTCGGCCTGC TCTCGTCGCACAGCTACGCGCCGATGGCGGCGGTGATGGCGGCGGGCATGGTGCCGCCGATCGGCATGGGCCTGGCGACCCTGCTGGCGCGGCGCAAGTT CGCCGAGAGCGAGCGGCAGGCCGGCAAGGCAGCCTCGGTGCTGGGGCTGTGCTTCATCTCCGAAGGCGCCATCCCGTTCGCCGCCAAGGACCCGTTGCGG GTGATCCCGGCGAGCATCGCCGGCGGCGCGCTGACCGGCGCCCTGTCGATGTACTTCGGCTGCAAGTTGCAGGCGCCTCACGGCGGGTTGTTCGTGATGC TGGTGCCCAACGCGATCAACCACGCCCTGGCGTACCTGCTGGCGATCGTCGCCGGCAGCCTGCTTACCGGGCTGCTCTACGCCGTGCTCAAGCGCGGCGC CGAGCCGGGACTGGCGTTGGGGACCTCGTCCTCGCGGGAGCCGGCGGCTGGCGGATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGCGAGGCGGTCATGCGCCCTACGCCACCTGAGCGACGTGGCAGGGGGTAGGGCGAATAACGCCGCAGGCGTTATCCGCCGAGACTCCGGAGAACCGGC GGATAACCGCAAGCGGTTATTCGCCCCAGCGGTCGATCCGACCTGGGGCGGCCTCAGGCCTGGCGCAACAGGCGCATGCCATCTTCCTGTGCGAGGCTGG CCTCGTTGATCGGCAACGAGCAGGACTGCCCGCGTCCCATCGGGTAGTAGTGGAAGCCGTGGCGGGCCATGCGCTCGGGGTCGTAGAGGTTGCGCCCGTC GAAGATCACCGGGGCCTTCAGGCGCTCCTTGAGCAGCTTGAAATCCGGTGCCTTGAATTGCTGCCACTCGGTGCAGATGACCAGCGCATCGGCGCCTCCC AGGGTCGCCTCGGGGGTGCCCATCAGGCTCAGGCGTTCGTCGTGGCCATAGAGCCGCTGGGTTTCCTGCATGGCTTCGGGATCGTAGGCGCGCACCTGCG
Amino Acid Sequence
>PTS fructose transporter subunit IIBC
MKLAIVTACPGGQVTSVLAARLLRGAAERLGWETCVEANAGSRPEGELSAEQIAEADWVLLVGVEPLAAARFVGKPVYRARPAEALADPRAFLQRAAALA SVEVAGDEAGLVAPEAGAAPRIVAVTACPTGVAHTFMAAEALQLAAGQLGFALQVETQGSVGARNPLDPADIAAADVVLLAADIDVDTARFAGKKIYRCG TGVALKQARATLERALAEGQVESAGAASAVVARDEKRGVYKHLLTGVSFMLPMVVAGGLLIALSLAFGIDAYKQPGSLAAVLRTVGDTAFVLMVPMLAGY IAYSIADRPGLAPGMLGGLLAGTLGAGFIGGIVAGFIAGYAARAISHGLRLPASLEALKPILVIPLLASLVTGLLMLYVVGKPVAGMLAALTGFLDGMGT SNAILLGLLLGGMMCVDLGGPVNKAAYAFSVGLLSSHSYAPMAAVMAAGMVPPIGMGLATLLARRKFAESERQAGKAASVLGLCFISEGAIPFAAKDPLR VIPASIAGGALTGALSMYFGCKLQAPHGGLFVMLVPNAINHALAYLLAIVAGSLLTGLLYAVLKRGAEPGLALGTSSSREPAAGG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site