Strain | Pseudomonas aeruginosa PAO1H2O. [Details] | |
DNA Sequence Upstream of Gene |
GAGGACAACCAGTACCTGCTGGAGGCGCCGGCCTACCGCGCCGCCAACCGCAGTTTCAAGGACGTGTCCGAGCTGCGCCTGCTGAAATTGTCGGAAGCCG ACTATCGACGCCTGCTGCCGTTCGTCAGCGCCTTGCCCGAAGATGCGCCGCTGAACGTGAACACTGCCAGCGCGCCGGTGCTGGCCGCCATGTTCGAGAT CGATCCGGGACAGGCGGAAAACATCGTGGACGCCCGCGGTCGGGAAGGTTTCCAGAGCAAGGACGATTTCACCAAGCATCTGACCCAGTTGGGTTCGAAG ACCGGAAACGTCAGTTATGCCGTCGGCACCCGCTACTTCCAGGTGATCAGCGAGGTCAGCCTGGGCGACCGCCGGCAGGTGTTGGTGAGTACCTTGCAGC GGGGCAAGGACGGCAAGATACGCGTGATGGCCCGCGACATGGGGCAGGGCGGCCTGCCCATCCCGTCGACGGGCGGCGACGATTGGAAGAAGGACGAGCG
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DNA Sequence for Gene |
>OU9_03155
ATGAGTGGAGTGAGTGCGCTGTTCCTGCCGCCCGCCAGCACGGCGGGGGCCGATGGGGAACTGGCGGTATGGTGGGTGCAGGATGGCGAGTGCCGGCGCG CGCCGTTTGCCCAGGCGCTGGCGGAGATCCGCGCGCCCTGGCGGCTGTACCTGCCGGTGGAGGCGGTGACCGCCTGCGCGGTGAACCTGCCTACACAGAA GGCGCGCTGGTTGCGCCAGTCGCTGCCGTTCGCGGTGGAGGAACAACTGGCCGACGATGTCGAGCAGATGCACCTTGCCCTTGGGCCGGCGCTGGCCGAC GGCCGCCACCGGGTATTCGCCGTGCAGCGCACCTGGCTTGCCGCCTGGCTGGCGCTGGCCGAGGGCGCGGGCAAGGCGCCGGCTTCGCTGCATGTCGATG CCGATTGCCTGCCGGGCGAGGGCAGTTGCCTGTTCTGGCTGGAAGAGCGCTGGTTGCTCGGCGGCAGCGGCGCCGTACGCCTGGCCTGCGGCAGCGAGGA TTGGCCGGTNCTGCGCGACAGTTGCCCGCCGCCGCAGCGGGCCTTCGCCGCGCAGGAGGTGGCGCCCCTGGAGGGGGTGGAAGTCCAGCCCCTGGCGGGC AATCCGCACGTCTGGCTGAGCGAGCAGCCGCTGGGCACCGACCTGGCCCAGGCCGAGTTCGCCGCGCGCCAGCAGAGCAGCCAGTGGCGCCGCTGGCGGC CGCTGCTGGGGTTGGTTGGGCTGTGGCTGGTATTGCAATGGGGCTTCACCCTGGTCCAGGCCTGGCAGTTGCAGCGCGAAGGCGACCGCTACGCGGCGCA GAGCGCAGAACTCTACCGCCAGTTGTTTCCCGAGGACCGCAAGCTGATCAACCTGCGCGCGCAGTTCGACCAGCACCTGGCCGACAGCGCCAGCAGCGGC GGCGAGGGCCAGTTGCTCGGCCTGCTTGGCCAGGCCGCCACGGTGATCGGCGGCGAGCCGACGGTGAGCGTCGAGCAACTGGACTTCAGCGCCGCTCGCG GCGACGTCGCCCTCCAGGTGCGGGCTCCCGGTTTCGACGTGCTGGAACGGCTGCGTTCGCGTCTCAGCGAGTCCGGGCTGGCGGTGCAGCTGGGTTCGGC CAGCCGCGATGGCTCGACGGTCAGCGCGCGCCTGGTGATAGGAGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GATGAAGGTGATGACGCAATTCCACGAGCGCCTCANGGCCCAGGCGGAAACCTCGCAGCTGGCGATCCGCTGGCGCGGGCTGCCGGCGCGGGACCGCCTG GCGCTGCTCTGGCTCGGCGCGTTCCTCCTGCTGGTGNTGCTNTACCTGGCGCTGTGGCGCCCGGCCGAGCGCCATNTGCAGTCGGCGCGGCAGTACTTCA CCGAACAGCGCGCGCTGCATGCCTACATCCAGCAGCAGGCGCCCAACGTGCGCCAGGCCGATGCCGCGGCGCCNCAGGCGCAGATCGACCCGGCGGCGCT GCAGGGCATGGTCACGGCTTCGGCGGCCCAGGCCGGACTGAGTGTCGAGCGCCTCGACAACGAAGGCGAGGGCGCCGTGCAGGTGGCCCTGCAGCCGGCG CCATTCGCCAAGCTGCTGCCCTGGCTGGAGCAGTTGAACGGGCAGGGCGTGCAGGTGGCGGAGGCCGGCCTGGACCGCCAGGTCGACGGCCGGGTCTCGG
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Amino Acid Sequence |
>general secretion pathway protein L
MSGVSALFLPPASTAGADGELAVWWVQDGECRRAPFAQALAEIRAPWRLYLPVEAVTACAVNLPTQKARWLRQSLPFAVEEQLADDVEQMHLALGPALAD GRHRVFAVQRTWLAAWLALAEGAGKAPASLHVDADCLPGEGSCLFWLEERWLLGGSGAVRLACGSEDWPVLRDSCPPPQRAFAAQEVAPLEGVEVQPLAG NPHVWLSEQPLGTDLAQAEFAARQQSSQWRRWRPLLGLVGLWLVLQWGFTLVQAWQLQREGDRYAAQSAELYRQLFPEDRKLINLRAQFDQHLADSASSG GEGQLLGLLGQAATVIGGEPTVSVEQLDFSAARGDVALQVRAPGFDVLERLRSRLSESGLAVQLGSASRDGSTVSARLVIGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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