Pseudomonas aeruginosa AZPAE14842, NR60_RS05015
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14842 AZPAE14842_contig_8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCGAACGAGCCCCCGCCGGTATAGCAGTTGAACAGCGGCGGGAAGACCTTGAGCGGCAGGGCGGCGGACATGAACAGGGGATGGTTCCACAGGCGCTG CAGCATGGCTTCGCCGATCTCCCGGGCCAGCGGGTGGTCCTGCGGCAGTTGCAGGTTGTGCTTGGCCTTGGCCGATTGGTAGCCGGCGGTCGCCTTGCCG TCGGCCCATTCCGCCTGCTCCAGGGCTGCGCGGATCCGGGAGACTTCCTCGGCGGTGAAGATGGCGGGAATATGCAGCAACATGGCGCTGTCCATGAAGG CGAAATGATTGCCAATGATATTGATTTGCATTGGACGTGTAAAACCGCCAGAAATTGTAGACGAGCGAGATGGGAAAAAATGTAATGAGAAAATTGTAAA GAATGTAAATTCCTGTCGAATGCGAATCCGTAATAATTGATAACAATTCTGATCTGCAATAAATTCCGCGACCTTCACAGCTCCCGGGGAGGGGTTTCGA
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| DNA Sequence for Gene |
>NR60_RS05015
ATGTCGCGTCAGTCCACGGATACCGCCGTTTCTTCGCAACGTCTGCTGGCTTCGGCCATCGGTGTCGCCATCACCGCCATCGCCGCACCGCAGGCAGCCC ACGCCGACGAGGCCGGGCAGAAAAAGACCGACAAGGACCGCGTACTGTCGCTGGATGCGGCCACCATCGTCGGCGAGCAGCAGGACGAAACCACCTACAA CGTCGACCGCTCGGCGTCGAAGAAGTACACCGCGCCGCTCTTGGATACGCCGCGCTCCGTCACGGTAGTACCAAAGCAGGTGATCAAGGATACCGCCGCC GTGTCTCTCCAGGATGCACTGCGTACCGTTCCAGGTATTACCTTTGGCGCGGGCGAGGGCGGCAATCCCACCGGTGACCGGCCATTCATTCGCGGCTTCG ATGCGCAAAGCGATACTTACGTCGATGGTGTACGCGATACTGGTGCACAGACCCGCGAGATCTTCAACCTTGAGCAGATCGAGGTCAGCAAGGGCCCTAA CTCGGCATTCGGAGGACGGGGCTCGGCCGGCGGCAGCCTCAATCTCGTCAGCAAGCAGGCCAAGGCTGGGAACTTCATCGATGGCGGCTTCACCTATGGT TCTGACCAGACTCGCCGCTACACCCTGGACCTCAACCAGGAATTCCTCGATGGCAATGCGGCATTCCGGCTGAATCTTCTCAAGCACGATGCCAATGTCG CGGGCCGCGATGAAGTCGATGTCAGTCGCTGGGGCGTAGCGCCGTCGCTCACCTTCGGTCTTGGCTCGCCGACCCGAGTGACCGTCAGCCATTATCACCT GGAAAGTGACGATACCCCGGATTCGGGCATTCCCTATGCCAAGAGTAGCGATCGCAGCAAGCACAATCCGGACAAACCGGTGAATGTTGATCGAGGCAAT TTCTATGGGCTGACGGGGCGCGATTTCCAGAAGAGCCGCATCGATACCAGTACCATCACCGTTGAGCATGATCTGACTGACAGCCTCACTATTCGCAATA CCTCGCGTTACGGCAATAGCCATCAGGACTATCTGTGGACACAACCGGATGACAGCCAGGGCAACATCAACAATGGCTCGGTCTGGCGCCGCCAGAACAA TCGGGTAAGTACCACCACCACAGCAGTCAACCAAACTGACCTGTTTGGAGAGTTCTACCTGGGTGGCTTCAAGAACAGCTTCAGCACCGGCCTGGAGTTC AGCCGAGAAGACAGCAAGCGCGATGGGTATATCGTCGATACCAATACCGGCCTGGGCAGCAACAAGTGCAATCCATCGCTGATCGGGGCGCCTAGCGGCT ATAACTGCACTAGTCTGGAAAATCCCAATCCGCACGATCCATGGAATGGCAGTATTACCCGGAAATATGCGCCGCTGAATACGGTCGGCACCACCAAGGC AATATATGCGTTCGACACCATCGACCTGAACGAGCAGTGGCAGGTCAATATTGGCGCGCGCTTCGATAGTTTCGAAACTACGGCGAAGAACCACGGTGTA AGACCCGCTACCAAACTCAGCGACAAGTCGAGCTTCTGGAACTGGCAGGCAGGCTTGGTGTGGAAACCTGTACCCAACGGCAGCATCTATGCGTCCTACG CCACTTCGGCTACGCCGCCGGGTAGCATGCTCGATAATGGGGATACCTCGAATGCTGTCGACGGGTTCGCCATCAGCAACAACCTTGAACCGGAAGAAAC CACGAACTACGAGCTTGGTACCAAGTGGGCTTTCTTCAACGAGCGGCTGGAGCTGAGTGCCGCGATCTTCCGCACCGACAAGGACAATACCCGCATCCTA GTCGCCAACCAGACCTACGACAACGCCGGACAATCCCGCGTCGACGGCGTGGAGTTGAGCGCCAGCGGCAAGCTGACCGAGAAGTGGAAGGTGTTCGCGG GCTACAGCTACCTGGACAGCGAGTTGGTCGATGCCGGTAAGGCTGGGCGTAACGGCAATGTGAACGCATCGGCGGCTTCCAACAACGGCAACGAGATGCC AAATACGCCGAAGAACAGCTTCAGTCTCTGGACCACCTATGACATCTTCCCGAAGACCACCATCGGCGGCGGGGCTTTCTATGTCGACAAGGTCTATGGC GACGTTGGCAATACCGTCTATGTCCCCGATTACTGGCGCTATGACGCAATGGCTAGCTACAAACTGAGCAAGAACGTCGATTTCCAGTTGAACGTGCAGA ATGTGTTCGACAAGAAGTACTTCGACAAAGCCTATGCGGCGCACTATGCGTCCCAGGCCGCTGGAAGGACGATACTGTTCAGCACCAACTTCCACTTCTG A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGCCGCTCTCGCTCCCCACGAAAGCCCCATTCCCCCTACGGGATGGGGCTTTCCCGCATCCAAGTGGGTAAATAGAGCGTAAAGAACGTTAATTCGGCT TTATCGCAACTGATTATCAAATAGAATTGCCCGCCGACGTCCTCGTGTCGTCTGGCCGGCGCTTGGCGTCGGCGTAGTCCCGTTGTTGCCGCGCGGCGGC CGTGAAGGTGATCCTGTGAAGAAAGTCTGGTTCCAGTTGCATTGGTTCTTCGGTATCAGCGCCGGCCTGGTGCTGGCGCTGATGGGCGTCACCGGAGCGA CCCTGTCGTTCCAGGACGAGCTGATGCGCGCGCTCAACCCTGACGTGCTGGTGGTGCAGAAGCGCCCCGAGGGCGTGCTGCCGCTGGACGAACTGGTGCG CCGTATCGAAGGCGCCGAGCCGGGGCGGAAAGTGGCCTTCGTCTGGGTCGAGATGGACAGCGACAAGGCTGGGCGGATCTTCTACACCCCGCCGCCGGGA
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| Amino Acid Sequence |
>TonB-denpendent receptor
MSRQSTDTAVSSQRLLASAIGVAITAIAAPQAAHADEAGQKKTDKDRVLSLDAATIVGEQQDETTYNVDRSASKKYTAPLLDTPRSVTVVPKQVIKDTAA VSLQDALRTVPGITFGAGEGGNPTGDRPFIRGFDAQSDTYVDGVRDTGAQTREIFNLEQIEVSKGPNSAFGGRGSAGGSLNLVSKQAKAGNFIDGGFTYG SDQTRRYTLDLNQEFLDGNAAFRLNLLKHDANVAGRDEVDVSRWGVAPSLTFGLGSPTRVTVSHYHLESDDTPDSGIPYAKSSDRSKHNPDKPVNVDRGN FYGLTGRDFQKSRIDTSTITVEHDLTDSLTIRNTSRYGNSHQDYLWTQPDDSQGNINNGSVWRRQNNRVSTTTTAVNQTDLFGEFYLGGFKNSFSTGLEF SREDSKRDGYIVDTNTGLGSNKCNPSLIGAPSGYNCTSLENPNPHDPWNGSITRKYAPLNTVGTTKAIYAFDTIDLNEQWQVNIGARFDSFETTAKNHGV RPATKLSDKSSFWNWQAGLVWKPVPNGSIYASYATSATPPGSMLDNGDTSNAVDGFAISNNLEPEETTNYELGTKWAFFNERLELSAAIFRTDKDNTRIL VANQTYDNAGQSRVDGVELSASGKLTEKWKVFAGYSYLDSELVDAGKAGRNGNVNASAASNNGNEMPNTPKNSFSLWTTYDIFPKTTIGGGAFYVDKVYG DVGNTVYVPDYWRYDAMASYKLSKNVDFQLNVQNVFDKKYFDKAYAAHYASQAAGRTILFSTNFHF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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