Strain | Pseudomonas aeruginosa strain AZPAE14842 AZPAE14842_contig_46, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGGTCGGACTATCCGACTTCAAGCCGGCCACCCGCATTTGAACGGCGGTTCGCCCCCATTGGGGGAATACCGGCTGAGGGAGAGGTCACGCATACGGTGG AAAGGTGAGCTTGTACCGGCTGGGCTTGGTGAACGTTTGGACAATCAGACTACGCGTGCTGAAGCGTTGTTTGGATAGGGGCAGAGGCAGAAAATACTCC AACCATTCAGCCTCACAATCCAAAAGCCATTGTGCAACTTTTTGGTTGATAACGTTGTGGATAGAACGCTAGGGAACAAATACCCAAAGGGCTCCGAGAG AGTGCGCAACTTTTTGCAAGCGGTGCGCAAAAAGTTGCGCAATTTTCAGTGTTCTTCCCATGAGAATCGCCAGCGAGTTTTTGGCTTCCCCCAATAACGC CTTGATGGAAAAGAGTTTCAAGACTAGTGGCACGGTTCTTGTCTAGCACCGATGTCCCCGGCATATCGCCTGGGCACTTTCAACGACAAGGAACGTATCC
|
|
DNA Sequence for Gene |
>NR60_RS31000
ATGGCAACCCCCGCCTATATGTCCATCACCGGCACCAAGCAGGGCCTGATCACCGCCGGCGCCTTCACTGAGGACTCGGTCGGCAACACCTACCAGGAAG GCCACGAGGACCAGGTGATGGTCCAGGGCTTCAACCACGAAGTGATCATCCCGCGCGACCCGCAGTCCGGCCAGCCGACCGGCCAGCGCGTGCACAAGCC GGTGGTCATCACCAAGGTCTTCGACAAGGCCTCGCCGCTGCTGCTGGCCGCCCTGACCTCCGGCGAGCGCCTGACCAAGGTCGAGATCCAGTGGTACCGC ACCTCCGCCGCCGGCACCCAGGAGCACTACTACACCACCGTCCTGGAAGACGCGATCATCGTCGACATCAAGGACTACATGCATAACTGCCAGGACCCGG GCAACGCCCACTTCACCCACCTGGAAGACGTGCACTTCACCTACCGCAAGATCACCTGGACCCACGAAGTCTCCGGCACCTCCGGCTCCGACGACTGGCG CTCGCCGGTCGCAGGGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GTTGACAGGCACACCGGTCGTACACCTGTACGGCCGGTTCTCCGTCGAGCCGAAAATGTCCGCTACTTCGCGAAATAGACACCGAGCCAAGACTTTCGGC AGCGGCTGAGCAAGAGTAACGTGGCTTGCTCCTCCAATGGATTGGAAAGGAACTGCCCACCCGGAACAGGGAACGATCCATGCGTCAAAGAGACCTGAAA TTCACCTTCGTCGTTGGCGAAGGGAACCTTGCGTTCGATGTCGTCGAGTTCGAACTGGAAGAAGCGCTCTGCGAGCCTTTCCGCCTGAACCTGAAGCTGG CCAGCGACAAGAACGCCATCGATTTCAAGCAGGTACTCGACCAGCCGGGCACCTTCACCCTCTGGGAGGACGGCCGTCCGGCCCGCTACGTCCATGGCAT CGTCAGCCACTTCACCCAGGGCAGCTCGGGTTTTCGCCGGACCCGCTACGAACTGCTGCTGGAACCGCAGTTGGCGCGCCTGGAGCTGTGCTGCAACTGG
|
|
Amino Acid Sequence |
>hypothetical protein
MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPTGQRVHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYR TSAAGTQEHYYTTVLEDAIIVDIKDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSPVAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|