Pseudomonas aeruginosa AZPAE14842, NR60_RS30380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14842 AZPAE14842_contig_44, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCGCAGAAGGACGACGGCACCAAGGAAGGCACGGCCGCCTCGACCTGGGACCTGGCCGCCAACCAGTTGGTCAAGTGACCGGGCGCCGACATGTCCGGA GCCCTGCCGCCGCTGTTCGAGCGCCTCAGCGCCGAGGCCGACGAACGTCCCGCGTTCGACGACCGGGCGCTGGCCGAGTCGGTCCGCGGCGAGCTGCTGC GCCTGCTCAACACACGGCGCCCGGCGCATGCGCGCAGCGGCATCCTCGCCTACGGGCTCGCCGACTGGACCGCCGTGCAACGCCTGCGCGCCGAGGACCG GCGCCAGCTGGCACGCGAGGTGCGGGCGGCGGTCGAGCATTTCGAGCCGCGCCTGCAACTGGCCGAGGTCGAGGTCGAACCTGACCCGGGCAATCCGCAG CGCCTGCGTATCCAGCTCGGTGGCCGCCTGCGCAGCGGGTCGCGCCTGATGCCTGCGCTATTCGTCATCGAACAGGGCAACGATGGCCTCGAGGTGCGCC
DNA Sequence for Gene
>NR60_RS30380
ATGAGCGATTCGATTGATGCCGACCTGCTCGACTACTACCAGCGCGAGCTGACCTGGCTGCGGCATGCCGGCGGCGCCTTCGCCGAGCGCTATCCGAAGG TCGCCCGGCGCCTGCAACTGGCCCCCGGCGAATGCCCCGACCCGCACGTCGAGCGTCTGCTGGAAGGCTTCTCGCTGCTCACCGCGCGCCTGCAACGGCG CCTCGACGACGACTACGCAGAGTTCAGCGACGCCCTCCTCGAACAGCTCTACCCCCTGGCGCTGCGCCCGCTGCCGTCCTGCGCGATCGTCCAGTTCGAA CCGGACCCGACCCAGGGCAACCTCGCCGAGGGCTACCGGCTGCCGCGCGACACCGCGCTGTTCGTCACCACCCGCGGCGGCGACAGCGTGCATTTCCGCA GCAGCGCCGAGGCGACTTTGTGGCCGCTGGCGATCGACGAGGCGACCCTGCTCGGCGGCGAGGAGGCGCAAGCCCTGACCGGAGTCGGCGCCGCCCGCTC GGCGTTGCGCCTGAGCCTGCGCTGCCTGGGCGAGTACCGCTGGGACGAACTGTCGATCGAGCGCCTGCGCATCCACCTGGCGGCTTCGCCGATGGGCTGC GCGATCCTCTACGACCTGCTCGCCGCGCATGCCGTGCAGGTCATGGCGGGGGCGCCCGGCACGCCGCCGGCGGCGCTCCGCGGACTGCCGGAGATCGTCG GCTTCGCCGCCGACGAGGCGCTGCTGCCGGAGGAAGACGGCGGACATCCGGGCCTGCGCCTGCTCGCCGAGTACTTCGCCTTCCCCGACAAGTTCCACTT CTTCGACCTGCCGCTGTCCGGCGCGCTCGCCGACGGACAGACGCTCTACCTGTACCTGGTCTTCGATCGCGCACCGACGGCACGCCTGCATTTGCAGGCG GAAGACTTCCAGCTCGGCTGCGCGCCGGCGATCAACCTCTTTCCGCGGACCTCGGAGCCGCTGCGCCCGGACGGCACCCGCAGCGAGTACCGCCTGGTCG CCGACAGTCACCGCGAGAACAGCGTGGAAATCCATAGCATCCGCGCCGTGCGCTCGGTTGCCGGGAGCACCGTGCAGCCAGTCCCGGCCTACTATGGCTG CCGCCACGACAGCCACCTCGGCACGCTCTACTGGCACGCCCGGCGCATCGCCGGGCTGACCCCGAACCGGCTGGGCAGCGACCTGCTGCTGAGCCTGGTG GATACCGGCTTCGACCCGTTGCGCGAGGCCCCGGCCTTCAGCCTGACCGCCGAGCTGCTATGCACCAATCGCTATCTGGCCGAGCGCCTGGGTGCCGGCA CCGCGCTGGGCTTCGAACGGCCCGGGCCGGTCGCCGCCGCACGCCTGCGCAACGCGCCCAGCGCGCAGAGCCAGCCGCGCCTGGACGGCCAGTCGCGCTG GAGACTGGTCTCGCAGCTGACCCTCAACCACCTCTCGCTGGTGGAAGGTCCGCGCGCCCTCGAAGCCTTGCGGGAAATCCTCGCCCTGCACAACCTGCGC GACGACGCCAGCGCCCGCCGGCAGATAGAAGGCCTGCGGCAACTCGACTGCCAGCGGGTGGTGGCGCACGTCGGCGAGGATGCCTGGCGCGGCTGGCGCA ATGGCCTGGAAATCCGCCTGCGACTCGATCCGCAACACTTCGTCGGCGCCAGCGGCGTGCTGTTCTCCGCCGTGCTGGCGCAGTTCTTCTCGCTGTATGC CACCGCCAACCGCTTCGTGCGCACGGTCCTGGTGGAAGCCGACAAGGAGGTGAAGACATGGCAACCCCAGGCCGGCTCGCCGCTCTCCCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCAGCGGCTGCGCCGCACGCCGCAGCGCTTCGAACTGTTGCAGGCGCTGCTGCTGCTCGAACGCGAGCGTCCCCAGGCGTTGCCGCTGGGCACCGGCAA CGCGCCGCGGGCGGAGGCCCTGCGCCTGCGCGGGCCGCTGCTGCCGCTGTTCGCCTCGAGCGAGGTGGAAAGCCTGCTCGACGACCCGCAGCAACCGGTG CTGTCCACCCCGGTGTTCGGCCTCGGCGGCCCCGACGGCCCGTTGCCCTATGCCTACCAGGAATGGCTGCAACAGCGTGCCCGGCAGAAGGACCATGCCC CCGCCGAGTTCCTCGACCTGTTCCAGCACCGCCTGCTCAGCCTGCTCTACCGGGTACTGCGCAAGCATCGCGTGGCGCTCGGTTTCGCGGTGCCGGCGGC GACCCCGGTGCAGGCGCAGCTACGCGCCCTCAGCGGCCTGTTGCCGAAAGCCCTGCAAGAGCGCCTGGCGCTGCCGGACAGCGCGGTGCTGGCACGCACC
Amino Acid Sequence
>type VI secretion system protein ImpG
MSDSIDADLLDYYQRELTWLRHAGGAFAERYPKVARRLQLAPGECPDPHVERLLEGFSLLTARLQRRLDDDYAEFSDALLEQLYPLALRPLPSCAIVQFE PDPTQGNLAEGYRLPRDTALFVTTRGGDSVHFRSSAEATLWPLAIDEATLLGGEEAQALTGVGAARSALRLSLRCLGEYRWDELSIERLRIHLAASPMGC AILYDLLAAHAVQVMAGAPGTPPAALRGLPEIVGFAADEALLPEEDGGHPGLRLLAEYFAFPDKFHFFDLPLSGALADGQTLYLYLVFDRAPTARLHLQA EDFQLGCAPAINLFPRTSEPLRPDGTRSEYRLVADSHRENSVEIHSIRAVRSVAGSTVQPVPAYYGCRHDSHLGTLYWHARRIAGLTPNRLGSDLLLSLV DTGFDPLREAPAFSLTAELLCTNRYLAERLGAGTALGFERPGPVAAARLRNAPSAQSQPRLDGQSRWRLVSQLTLNHLSLVEGPRALEALREILALHNLR DDASARRQIEGLRQLDCQRVVAHVGEDAWRGWRNGLEIRLRLDPQHFVGASGVLFSAVLAQFFSLYATANRFVRTVLVEADKEVKTWQPQAGSPLSL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site