Pseudomonas aeruginosa AZPAE14842, NR60_RS30375

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14842 AZPAE14842_contig_44, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCATTCTCGATTTCGGCAGCGACATCAAAGGCGACAGCCTGCTCGTCGGCTACGAAAACAAGATCGAAATCATGTCCTACAGCCACAACGTGGCGATGCA GGTCACCAACGACGTCAGCAACTCGGAGCGCACCTCCGGCAAACCCCACGTCGGCGAATTCACCCTCACCAAGTTCATCGACACCTCGACCCCGACCCTC AACGAATACTGCTGCGCCGGCAAGCCGATCGCCGAGGCGACCATCACCATCGGCCGCAACGCCGCCGAGGGCAACGGGCAGATCATGCCCTTCATCGTCT ACACCCTGAACAACGTGGTGCTCTCCAACGTCAGCGTCAGCGGCGGCGCCGGCGGCAAGCCGGTGGAGACCCTGTCGCTGAACTTCACCAAGATCAAGTG GGAGCTGACCGCGCAGAAGGACGACGGCACCAAGGAAGGCACGGCCGCCTCGACCTGGGACCTGGCCGCCAACCAGTTGGTCAAGTGACCGGGCGCCGAC
DNA Sequence for Gene
>NR60_RS30375
ATGTCCGGAGCCCTGCCGCCGCTGTTCGAGCGCCTCAGCGCCGAGGCCGACGAACGTCCCGCGTTCGACGACCGGGCGCTGGCCGAGTCGGTCCGCGGCG AGCTGCTGCGCCTGCTCAACACACGGCGCCCGGCGCATGCGCGCAGCGGCATCCTCGCCTACGGGCTCGCCGACTGGACCGCCGTGCAACGCCTGCGCGC CGAGGACCGGCGCCAGCTGGCACGCGAGGTGCGGGCGGCGGTCGAGCATTTCGAGCCGCGCCTGCAACTGGCCGAGGTCGAGGTCGAACCTGACCCGGGC AATCCGCAGCGCCTGCGTATCCAGCTCGGTGGCCGCCTGCGCAGCGGGTCGCGCCTGATGCCTGCGCTATTCGTCATCGAACAGGGCAACGATGGCCTCG AGGTGCGCCATGAGCGATTCGATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCCGACCTGCTCGACTACTACCAGCGCGAGCTGACCTGGCTGCGGCATGCCGGCGGCGCCTTCGCCGAGCGCTATCCGAAGGTCGCCCGGCGCCTGCAA CTGGCCCCCGGCGAATGCCCCGACCCGCACGTCGAGCGTCTGCTGGAAGGCTTCTCGCTGCTCACCGCGCGCCTGCAACGGCGCCTCGACGACGACTACG CAGAGTTCAGCGACGCCCTCCTCGAACAGCTCTACCCCCTGGCGCTGCGCCCGCTGCCGTCCTGCGCGATCGTCCAGTTCGAACCGGACCCGACCCAGGG CAACCTCGCCGAGGGCTACCGGCTGCCGCGCGACACCGCGCTGTTCGTCACCACCCGCGGCGGCGACAGCGTGCATTTCCGCAGCAGCGCCGAGGCGACT TTGTGGCCGCTGGCGATCGACGAGGCGACCCTGCTCGGCGGCGAGGAGGCGCAAGCCCTGACCGGAGTCGGCGCCGCCCGCTCGGCGTTGCGCCTGAGCC
Amino Acid Sequence
>type VI secretion protein
MSGALPPLFERLSAEADERPAFDDRALAESVRGELLRLLNTRRPAHARSGILAYGLADWTAVQRLRAEDRRQLAREVRAAVEHFEPRLQLAEVEVEPDPG NPQRLRIQLGGRLRSGSRLMPALFVIEQGNDGLEVRHERFD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site