Pseudomonas aeruginosa AZPAE14842, NR60_RS29915
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14842 AZPAE14842_contig_41, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGTCGGGGCGATGTCGTGGTTGTAGCGGGGACTGTCGAGTACGTCGCTGCCGGCGGACAGCTCGACCAAGCCGTCGCGCTCGGTCACTTCCGATCTGCT CTGTTGCATGGGCCTCTCCAGAATTCTTTTAGTTATTCGCTCATCGGGCTAATGCGATGGCCGGAGTACCGCACCACCAGTACTGCACCTCCGGTCCGGA CAATGCCGTGGCGGGCGGCACTCAATAAGCGTGCCGAAAACCCCGCGACGTCACTGGGCAGGCCGGTCTACTGGAGGTAACCGACTGATCTGAAACACTT CATCGACAACGTCGGTGACACGCCGACGGGCAGTCCGGCGTGTCACCGGGGGAAATGCGCGAGCCTGTCGCCCCGTCAGGAACCAAAGGAGTGCAGGCGA ACTTTTTTCATCTCCCCACAACCGCTCGAACACGGCTTTCAAGCGGCTGATTTTGCATGGGAAATCTCGACCTTTTTGAATTCTTGTCAAGCGCGTCAAA
|
|
| DNA Sequence for Gene |
>NR60_RS29915
ATGGTGAGAACCCTCACCATTTTGGTGATATTTATTTTTAATTATTTAAAATCAACAAGTTACAAACTCAAACAACCATTTGAAAATAATCTTGCTCAAT CGATGATCAGCATCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ATTCGAATCCTGTCAGCGCTGACAGGATTACAGAAGCCCTCGGCGCATGGCGAAAAAACAATTTCAAGAACCGGCAACGACCGGTCAGCCTGCGAGGAAA GACGGCATGTCCCTGTTGATCCGTGGCGCCACCGTGGTTACTCACGAAGAGAGTTATCGAGCCGACGTGCTCTGTGCCAACGGCCTCATCCAGGCCATCG GCGAGAACCTCGCCCCCCCCTCCGGCTGCGACGTCCTCGACGGCGGTGGCCAGTACCTGATGCCGGGCGGCATCGACCCCCATACCCACATGCAGTTGCC CTTCATGGGCACGGTGGCCAGCGAGGACTTCTTCAGCGGCACCGCGGCCGGGCTGGCCGGAGGGACCACCTCGATCATCGACTTCGTCATCCCCAACCCG CGACAGTCGCTGCTGGAGGCCTTCCACACCTGGCGCGGCTGGGCGCAGAAATCCGCTGCGGACTACGGCTTCCACGTCGCCATCACCTGGTGGAGCGACG
|
|
| Amino Acid Sequence |
>hypothetical protein
MVRTLTILVIFIFNYLKSTSYKLKQPFENNLAQSMISI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|