Strain | Pseudomonas aeruginosa strain AZPAE14842 AZPAE14842_contig_24, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AACGGCAGGGCGCTGCCGAGCACGGTGGTCTCGCTCTTCAGCAGCTTGGAGCCCAGCAGGCTCTTCAGCGAGCGCATCAGCCGGCCCTCGTAGCCCTCCA GGTACTCGCCTAGCGCCTGGCGGCCGTAGACCGGGCGGCGCTCCTCGACGTTGAAGAACACCACCGAGGGCAGGGTGATCTTGCCGTCCTCCAGCTCGAT CAGCGGTTCGACCTCCGGCCGCCACCAGCCGACGGTGGAGTTGGAGGTGCCAAAATCGATGCCCAGGGCGCGGGCGGCGGTGCTCGGGTTCATGGCGCGA AACGGTCCGGGAAAAAAACGGCCGCGCAGTGTATGCGAGAGCGTCGCGGATTTCACCGCCGGCGATCGGCAGGAAGCGTCCTGGTACGTCCGTGCGGGCC GCCCCGACCTTTGTATACGGATTTGCCAAGGGGCCCGCGCATGGTGCTATGTTGGCGCTGCTTTCCCACTCCGTCTTGCCGTGTTGTCCTGGATTTCGTC
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DNA Sequence for Gene |
>NR60_RS22150
ATGCATAGAGCCTCACACCATGAGTTGCGTGCGATGTTTCGCGCGCTGTTGGACTCCTCCCGTTGCTACCACACCGCTTCCGTGTTCGATCCCATGTCGG CGCGCATCGCCGCCGACCTCGGCTTCGAGTGCGGCATCCTCGGCGGTTCGGTGGCTTCCCTGCAGGTCCTGGCGGCGCCGGACTTCGCCCTGATCACCCT CAGCGAATTCGTCGAGCAGGCCACCCGCATCGGCCGGGTGGCGCGCCTGCCGGTGATCGCCGACGCCGACCACGGCTACGGCAACGCGCTGAACGTAATG CGTACGGTGGTCGAACTGGAGCGCGCCGGAATCGCCGCGCTGACCATCGAGGACACCCTGCTGCCGGCGCAGTTCGGGCGCAAGTCCACCGACCTGATCT GCGTCGAGGAAGGCGTCGGCAAGATCCGCGCGGCCCTGGAGGCGAGGGTCGACCCGGCGTTGACCATCATTGCCCGGACCAACGCCGAACTGATCGACGT CGATGCGGTGATCCAGCGCACCCTGGCCTACCAGGAAGCCGGCGCCGATGGCATCTGCCTGGTCGGCGTGCGCGACTTCGCCCACCTCGAGGCGATCGCC GAGCACCTGCACATCCCGCTGATGCTGGTCACCTACGGTAATCCGCAACTGCGCGACGACGCCCGCCTGGCGCGGCTCGGCGTGCGTGTCGTGGTCAACG GCCACGCCGCCTATTTCGCCGCGATCAAGGCGACCTACGACTGCCTGCGCGAGGAGCGCGGGGCGGTGGCCTCGGACCTGACCGCCTCGGAGCTGTCGAA GAAGTACACCTTCCCCGAGGAATACCAGGCCTGGGCCCGCGACTACATGGAAGTCAAAGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGACCTCAGGCCAGGCGCTGGCGCAGCGCCTGGTACAGCGGCAGGTCGCGTTCGTACTGGCCGGGAACCAGGGCGTGGCGGTGCTCGGCGAGCATGCCC AGGTAGTCGTCCACCGCCGTGCGGTAGCTGGCCAACTGGTCGGTGGCCAGGGGCTGGCCGGCCATGGCGCGGATATCGAAAGCCCATTGCAACCCGTCGC GGGCGTTCGAATAGGCGGCGCCGTCCATGCCGGCGGTGAGCGCCAGCCACTGGTCGAGGAAGGCCTGCGGTGCGTCGCGCGGGGGGAAGTGGCGGATCTT CGCGGCGCCCACCTCGGTGATGCCGTCGCCGTCCAGGTCGACGCTGTAGCCTTCCGGCAGCAGCAGGTTGCGCGCGCCTTCCTCGCTCAGCGCCTCGACC CGGATCGGCTCGGCCAGGCCCATGTTGCGCTGCAGCGCCTGCAGGTCGTCGGCGCCCAGGCGGGCGAGGAAGCCGCGGGCGTCCAGTTGCGCGCCGTTTT
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Amino Acid Sequence |
>oxaloacetate decarboxylase
MHRASHHELRAMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVM RTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIA EHLHIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFAAIKATYDCLREERGAVASDLTASELSKKYTFPEEYQAWARDYMEVKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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