Strain | Pseudomonas aeruginosa strain AZPAE14842 AZPAE14842_contig_23, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGGGAAGTCCACGCATGTCCTACGACTACGAGAAAACCAGCCTCACCCTCTACCGGGCGGTATTCAAGGCCAACTACGACGGCGACGTCGGTCGCTACCT GCGCCCCGACCAGGAACTCGCCGAGGCTGCGGAAGTCGCCCCGCTGCTGCATCCGACCTTCGACAGCCCCAACACCCCTGGCGTCCCCGCCCGCGCGCCG GACATCGTCGCCGGCCGCGACGGCCTCTACGCCCCGGACACCGGCGGCACCTCGGTGTTCGACCGCGCCGGCGTGCTGCGCCGCGCCGACGGCGACTTCG TGATACCCGACGGCACCGACATCCCGCCGGACCTTAAGGTGAAACAGGACAGCTACAACAAGCGCCTGCAAGCCACCCACTACACCATCATGCCGGCCAA GCCGATGTACCGGGAGGTCCTCATGGGCCAGTTGGACAACTTCGTGCGCAACGCCATCCGCCGCCAATGGGAAAAAGCCCGCGGGCTCTAGGAGTGAACC
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DNA Sequence for Gene |
>NR60_RS21215
ATGAACCTGAAACCCCAGACCCTGATGGTGGCGATCCAGTGCGTCGCCGCGCGCACCCGCGAACTCGACGCGCAGTTGCAGAACGACGACCCGCAGAACG CCGCTGAACTCGAACAGTTGCTGGTCGGCTACGACCTCGCCGCCGACGACCTGAAGAACGCCTACGAGCAAGCCCTGGGCCAATACAGCGGCCTGCCGCC CTATGACCGGCTGATCGAAGACCCGGTGTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGCCCGTGGGCGGGCCGTCGTTGGCCCGCCCGCTCCAGCGCGCGCAGAGAAACGACAGATGGTCTTCGGCTGGCACGGCGACACCATCACCCGCGACAC CGCAGTGTGCCGCGACTAGCGCAACGCCCAGGACGTACGGCGCTTCCTCGTCGGGCTGTGCGGCGCCGACTTCCGCTTCGATCGTGCCTTCATGGCCTGG ATTGGCGACGGCGCGGCAAAATCCCTGGGTGAGGTGGCGGACGAACGGCGGCGGCGCCACGCCGACACCAGCCCCTCCGCCTGAGCGAGCGCTCAGGCGC GGAAATGGCTCGGCGGCTGGCCGCTCCAGCGCTGGAAGGCATGGCGCAGGCTGGCGGTCTCGCTGAAGCCGAGTTCCTCGGCGATCCGGTAGATCGGCAT GTCGCCGCTCTGCAACAACTCCTTGGCGCGGGCGAAGCGCAACTCGTCGAGCAATTGCTGGTAGCTGGTGCGCTGCTGCTGCAAGTGCCGGCGCAGGCTG
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Amino Acid Sequence |
>hypothetical protein
MNLKPQTLMVAIQCVAARTRELDAQLQNDDPQNAAELEQLLVGYDLAADDLKNAYEQALGQYSGLPPYDRLIEDPVS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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