Pseudomonas aeruginosa AZPAE14842, NR60_RS21200
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14842 AZPAE14842_contig_23, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCCGCAGGGCCTGCCGCGGGAAACCGCGTTGCAGCTGTTCACCCACGGCAGCGCCTGGTTCTCCAGCGAGCAGGGCAAGAAAGGACAGATCAAGGTTGG CCAGCTCGCCGACCTGGCGGCGCTGTCGGCGGACTTCTTCGGCGTCGAGGAAGAGGCCATCAAGTGGATCGAGTCGGTGCTCACGGTGGTCGACGGCAAG GTCGTCTATGCCGCCGCCGAGTTCGACAAGCTCGGTCCGCCGGCGCCGCCGGTGCTGCCGGACTGGTCGCCGGTGGCCAAGGTACCCGGCCACTGGCGGC AAGGCGCGCCGCTGACCGCCCAGGTCCACCAGTGCGTCGGTGCCTGCGCGGTACACGCCCACGAGCACAACCGCGCGCGCCACTCCAACGTACCGGTGAG CGACTTCCAGGGTTTCTGGGGCGCATTCGGCTGTTCCTGCTTCGCTTTCTGACGTACCCGGGCGGGCCCTTCGCGGCCCGCCTCGCCCGGAGTTTTCCCG
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| DNA Sequence for Gene |
>NR60_RS21200
ATGATCCGCGTTCGACCGGTCGGCCGCCTGGCCCTTTTCCTGGCGCTGGGCGGCACCTCGCCGTGCCACGCCGCGACAGAGGAAGCCAAGGCACCCGACT ACCTGGAGTGGCGCCTGCTCAACCGCAACTACTTCCTCTACAACGACTATCGCCGCGCTGACGCCGGGCGCGGCTACCGCAAGGAATGGGCACACGGCCT GATCGCCGACCTGGAGTCGGCCTATACTCCCGGCCGCGTCGGTTTCGGCCTCGATCTCCACGGCTTCGCTGGCTTCAAGCTCGACGGCGGACGTGGCCAT GCCGGCACCGGCCTGTTGCCGCTGGACTCATCCGGCGATAACGCCAGCGAGTATTCCGACGCCGGCGCCGCACTCAAGCTGCGGCTCGGCGAGAGCCTGC TCAAGGTCGGCGAGATGACCGTCGAGACCCCGGTCTTCGATACCAGCGACAAGCGCCTGCAACCCCAGTACGCCAGGGGCTTCTTCCTGCAGAGCGACGA CCTCGACCGCGTGCGGATCCAGGCCGGGCGCTTCACCGCCTTCAAGGAACAGGCCTCCAGCTCCGGCCATGGCGACTTCGACGGCTACGGCGCGAGCACC GCCGGCAGCGCCATCGGCTTCGCCGGTGCCAGCCTGGCGGCCAGCGACAACCTGAGCGGCTCGCTGTTCGCCGCGCAACTGGACAACGTCTGGCGCCAGG TCTATCTCAACATGAACCTGCAACGTGCCGCGTTCAGCCTGGATGGCAACCTCTATCGCACGCGCGACCAGGGCCGCAGCCGGGCCGGCGCGATCGACAC CCTGGCCTACAGCCTGCAACTGAAGTACCGCGTCGGCGCGCAGGGTTTCTCCCTGGCCTACCAGCGTGTCCATGGGGATACGCCGTTCGACTTCGTCGGA GGTGACTCCATCTACCTCGCCAACTCGATCAAGTACGCCGATTTCAACGGTCCCGGCGAACGCTCCTGGCAGGCCCGCTACGACCTCGACCTGGCCCCGT TCGGCCTGCCGGGGCTGAGCTTCATGGCGCGTTACGTCAGCGGCCGCGCCATCGACGGCAGCCATGCGCCGGCCGGCGGCGCCTACAACCCGCTGGGCGC CGATGGCCGCTACCGGCCCTTGCAGGGCAGCGGCGGCAAGCACTGGGAGCGCGACCTCGACCTGCGCTACGTGTTCGCCTCGGGCCCGCTCAAGGACCTC TCGCTGAACGTCTCGCACCTCAGCCACCGGGCCAACGCGGCCCAGGCCGGCGACGACATCGACCGCCTCTACCTGATCGTCGAATACCCACTCAAAGGCT CGCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCATGACCGCACCCGCCGCCTCACCCTGGAGTCCCCTGCGCCAAGCCACCTTCCGCTGGCTATGGCTGGCCAGCATCGCCTCGAACATCGGCACCTGGAT GCACGAGGTGGGCGCCGGCTGGCTGATGACCTCGCTTTCCGCCAGCCCGCTGAACGTGGCCCTGGTGCAGGTCGCCGGATCGCTGCCGATGTTCTTCCTG GCCCTGCCGGCCGGCGCCCTCGCCGATATCGTCGACAAGCGCCGCTACCTGCTCGGCGTGCAATTGTGGATGGCCTTGGTGGCCACCCTGCTGGCCAGCC TCACCCTGCTCCAGTTGACCAGCGTCTGGCTGCTGCTCGGCCTGACCCTGTGCATGGGCATCGGCACCGCGCTGATGATGCCGGCCTGGAGCGCCACCAC TCCGGAACTGGTGGGCAAGGACGAACTGCCGGCGGCGGTGGCGCTGTCCAGTGTCGGGGTCAACCTGGCGCGGGCGGTCGGACCGGCCATCGCCGGGGTG
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| Amino Acid Sequence |
>membrane protein
MIRVRPVGRLALFLALGGTSPCHAATEEAKAPDYLEWRLLNRNYFLYNDYRRADAGRGYRKEWAHGLIADLESAYTPGRVGFGLDLHGFAGFKLDGGRGH AGTGLLPLDSSGDNASEYSDAGAALKLRLGESLLKVGEMTVETPVFDTSDKRLQPQYARGFFLQSDDLDRVRIQAGRFTAFKEQASSSGHGDFDGYGAST AGSAIGFAGASLAASDNLSGSLFAAQLDNVWRQVYLNMNLQRAAFSLDGNLYRTRDQGRSRAGAIDTLAYSLQLKYRVGAQGFSLAYQRVHGDTPFDFVG GDSIYLANSIKYADFNGPGERSWQARYDLDLAPFGLPGLSFMARYVSGRAIDGSHAPAGGAYNPLGADGRYRPLQGSGGKHWERDLDLRYVFASGPLKDL SLNVSHLSHRANAAQAGDDIDRLYLIVEYPLKGSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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