Pseudomonas aeruginosa AZPAE14842, NR60_RS15020

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14842 AZPAE14842_contig_16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGTCCTCCCACTGGTCGTGGGCGCGCACCCGGCGTACCTGTTCGGGCGTGCGCAGGCGTTGCGCCTCCAGCACCGCGCCGAGATCGGCGACGGCCGCAGC CGAGTCCGCCGCCGGCGGCGGCGGGAGGTAGTCGGCCAGGCGCGGTGGGTGGGCCAGCGGATAGGGCGCGGCGGCGGTCTCCCCGAGACAAGACAGCGGT GCGAGCAGCGAAAGGCAGAGCAAGAGCGAAGGGCATAGGGTCTTGTTGTTCATGAAGCGTATTCCCTGAGGCGAGGTTGCATCGGGAGCCGAGGCTCCCA CCCACGGCCGTTGCGGATGACGGCCGACGCCACACTCTCCGTCGGTGACTTCCGAAATGCTTGACCCGGCCTGCCGTTGCACATGCCAGCCCCTGCCAAT GGCAGGCCCCGGCAAAAGCCGAGGCAGGGAAACACAAGCGGCCTGCGGAGCGACTTCCGAGACTGCGCCCACCTGGCACTCAGGTGGGAGAAAACAATAA
DNA Sequence for Gene
>NR60_RS15020
ATGCAAAATCTCAGACGCGCTGTATTCGCCGGCCTGGTCGCCGGCACGCTTTCCGAAGGGGCGGCCGCGACGGCCGGGGATGGGGGCTTCGTCGAGGACA GCGAACTGCAGTTCCTCGCCCGCACCTACTACTTCAACCGCGACTACCGCGACAGCCCGAACAACGCCGGGCGCAACCGCTTCAAGCCCAGGAGCGAGCG CAACGGCTACCGCGAGGAAACCACCCAGGGCCTGCGCCTCCAGTTCGCCTCCGGCTACACGCCGGGCAGCCTCGGCTTCGGCCTCGACGCCCATGCCATG CTCGGCCTGCAACTGGACAGCGGCGGCGGCCGCACCGGCACCGGCAACCTGCCGGTCGGCGCCGACGGCCATCCCGACCATCGCTACGGCAAGGTCGGCG GCGCCCTCAGGCTACGCCACGGCGAAACCCGCCTGAAGTACGGCCAGACCACCACCAGCGCGCCGGTGTTCGCCGCCAGCAGCAACCGCACGCTGGCCGG CATGGCCTACGGCCTGCTGCTGGAGGATCGCTCGTTCGACGGGCTGCTGCTCGAGGGCGGGCGCTTCACCGCCGCCTCCGGCCCCGGCGAATCCAAGGTC CGTGGCGACATCAGCACCGTCTACGGACGCCTCGGCGCCTATCCGGTGCGCCTCGACGCGGTCGGCTTCCTCGGCGGTCAATGGCAGGCCACGGAGCGGC TGCAACTGTCGCTCTACGCCTCGCGCTTCGACGACATCTGGCAGCAGGCCTATTTCGGCGCCAGCCATCGCCAGCCGCTGGGCGGGGAGCGCGCGCTGCG GGTCGACCTCGACGCCTACCGCACCCGCGATAGCGGCCAGAGCCGCTTCGGCCGCATCGACACCCTGGCCAGCTCCCTGGCCCTGGGCTACGAACAGGGG CCGCAGCGCATCACCCTGGCCTACCAGCGTGTCCATGGCGAGCAGCCGTTCGACTACATGGCCTTCGGCGACGGGCGCTCCAGCGCGTCCATGGTACTGG CCAACTCGGTGGGCTACTCCGACTTCAACGGACCGGGCGAGCGTTCCTGGCAATTACGCTATGACCTGGACCTCGGCGCGCTCGGCCTGCCTGGGCTCAG CCTGCATGCGCTGCATGCCCGCGGCCGTGCCGGGGCCAGCGCCAGCAGTGCCGCCGAGAGCATCTACGCCGGACTCTACGGGCGTGACGGGCGGCACCGG GAAAGCGACCTCGGCTTCGCCTATCGGGTCAAGGCGGGCCCCCTCGCCGGCCTCGCGCTGCGCGCCTCGCAGGCCTGGCACCGGGGCAACGCGAGCTATC TCGACGGCGACATCGACGAAACCCGGCTGGTCGTCGATTACTCCCGCTCGATCTGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCCCCGGGCCGCCCCGCGAGGCGGCCCGGATCGTCCTCACGCGCGCGGCAGCAACTGGATGAACAAAGGCGTGGAGAGCAGCACCAGCAGCGTGGTGAT CAGCACCATGCCTGCCACTTCGTTCACCGGGCCGTCGTAACGCTTGGCCAACAGGTAGGTGAGCACCGCGGTCGGCATCCCGCACTGGATGGCGAAGGTG CCCGCCGCCACCGCCTCCATGCCCAGGCCGGCAGCGATCCCATAGCCGACCGCGAAACCGCCCCAGACCCGCACCAGAGACAGCAGCAACGGCCGCCAGG TCTCGTGCAGGCGCAGACCGGCCAGCGACAGGCCGAGCATCACCAGCATCAGCGGCACGGTAATCCCGCCCAGCAGGCGGGTCACATCGCGCAACGGCGG CGGCAGGCTCCAGCCCAGGGCGATCAGGCCCAGCGCCACGGCCAGGGCATAGATCATCGGGTTGCGCAGGATGCTCGCCGGGGTGATATCGCCCGAAGCG
Amino Acid Sequence
>porin
MQNLRRAVFAGLVAGTLSEGAAATAGDGGFVEDSELQFLARTYYFNRDYRDSPNNAGRNRFKPRSERNGYREETTQGLRLQFASGYTPGSLGFGLDAHAM LGLQLDSGGGRTGTGNLPVGADGHPDHRYGKVGGALRLRHGETRLKYGQTTTSAPVFAASSNRTLAGMAYGLLLEDRSFDGLLLEGGRFTAASGPGESKV RGDISTVYGRLGAYPVRLDAVGFLGGQWQATERLQLSLYASRFDDIWQQAYFGASHRQPLGGERALRVDLDAYRTRDSGQSRFGRIDTLASSLALGYEQG PQRITLAYQRVHGEQPFDYMAFGDGRSSASMVLANSVGYSDFNGPGERSWQLRYDLDLGALGLPGLSLHALHARGRAGASASSAAESIYAGLYGRDGRHR ESDLGFAYRVKAGPLAGLALRASQAWHRGNASYLDGDIDETRLVVDYSRSIW
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site