Pseudomonas aeruginosa AZPAE14842, NR60_RS14880

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa AZPAE14842
GCF_000789625.1|latest
Locus Tag
NR60_RS14880
Name
Replicon contig_16
Genomic location 129157 - 130491 (+ strand)

Cross-References

RefSeq WP_003083884.1
GI 489174350
INSDC BAP19290.1
NCBI Locus Tag NR60_RS14880
UniParc UPI0001E9E70C
UniProtKB Acc A0A077JP47
UniProtKB ID A0A077JP47_PSEAI
UniRef100 UniRef100_V6A7C8
UniRef50 UniRef50_V6A7C8
UniRef90 UniRef90_V6A7C8

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Synonyms
Evidence for Translation
Charge (pH 7) -15.39
Kyte-Doolittle Hydrophobicity Value -0.482
Molecular Weight (kDa) 48.8
Isoelectric Point (pI) 4.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3SY9 MEMBRANE PROTEIN 07/16/11 Crystal structure of Pseudomonas aeruginosa OccD2 (OpdC) Pseudomonas aeruginosa 2.8 X-RAY DIFFRACTION 99.1

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000160 (436 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: NR60_RS14880
Search term: porin

Human Homologs

References

No references are associated with this feature.