Strain | Pseudomonas aeruginosa strain AZPAE14842 AZPAE14842_contig_15, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCTGTTCCAGCGCAGCCTGGGCATGGGCTTCGCCGACTGGCGGCGGCAGGTGCAGCTGGCGACCGCCGCCGCCGCACTGATCGATGGCCGTCCGGTGGC AGGCATCGCCCATGCCCTGGGATATACGCCGAGCGCCTTCAGCGACATGTTCCGCCGCGAGCTGGGCGTCTCTCCCACCGAGTACAGGGCCGAGCATCAC CAGCCGTTCCAGCCTTGACCGGTATTCGATAGCGATTGGCCGATAGATGTTTTTTCGGCCAACTAGACTGGCACCATCGTTCACCGTCCCTGTCAGCCGC CATGAACTACCTGATCTCCCTCGGCATCGGCCTGCTGGTCGGCGTGCTCTACGCCGTACTCGACTTCCGCTCGCCGGCGCCACCCGCCATCGCCCTGGTC GGCCTGCTTGGCATGCAGCTCGGCGAACAGCTTTTCCCCCTTGGCCGCGACCTGCTGCAGCAGTGGCTGCACTGATCGCCGCGACGACACGGAGCCCCCA
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DNA Sequence for Gene |
>NR60_RS13060
ATGAAAGCACTGCAATTCGACCGTACCGGCGACCTCGCCGCCCTCAAGCTGGTGGACATGCCCGATCCGCTTCCCGCCGCCGATGAGGTGCGGGTGGAAA TCCGCGCCGCCGGGCTGAATCCGAGCGACGTGAAGAACGTCCTCGGCCGCTTCCCCTATACCACCCTGCCCCGGGTACCGGGCCGCGACTTCGCCGGGGT GGTGGTGGAGGGACCGAAGGCCCTGCTCGGCCAGGCGGTCTGGGGCACCGGGCGGGAGCCGGGATTCTTCCGCGACGGTAGCCACGCGCAGTTCCTGACC CTGCCAGCCGCCGGCGTCGCGCTCAAGCCGGAAAGCCTGAGCTTCGCCCAGGCCGCCAGTTGCGGGGTGCCCTACAGCACCGCCTGGGACGCCCTGCAAC GCAGCCAGGTCAAGGCCGGTACCCGGCTCCTGGTAATCGGCGCCAACGGCGCGGTCGGCAAGGCCGCGCTGGCGCTGGCCAAGGCCTTGGGGGCCGAAGC GATCGGCGCGGTGCGGCGCGAGGAGCAACGCCAGGCGCTGGAAACGCAGGGCATCGCCGCGCTGCTGCTGGGCGAGCCGGCCGAACTGGCGGCACAGGTG GAAGGGATCTTCCCCGGCGGGGCCGAGGTGATCTTCGATACGACCGGTTTCTGGCTCGAGGCGGCGGTCCCGGCGCTGGCCGCCTTCGGTCGCCTGGCGA TCATCGCCGCACCAGCCGACGGCCATGTGCGCCTGCCGGCGTTGAACCTGTACCGTCGCGGTGGCTCGGTGGTGGGGATCAACTCGCTGCTCTATGGCGT GGAAGCCTGCGCAGGCTTCCTCGACGCCTTCGGCAAACTGTTCGACCAAGGCCGCCTGCCGCTGCCGGACGGGCTGCGGGAAGTCCCGCTGGAGCAGGGC GTTGAGCAGTACCGGGCAGTGAACGAAGGCACCTGCGAGAAGATCATCCTGGTGCCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGACCAGCGGAATCCCGGCAGAACACGCCGGGATTCCGCTGCGCGCAAGACTACTCCGCGCCGACCGCGAGCTTGCGGGCGCTGCGCGCCTCCTCCAGCT GCATGCAGCGCTCGAGGAACAGGTACATGTAGTCGTAGCTCTTGCAGATCGCGTCGCGCAGTTGCCGGCGCAGCTCGGCGCTGGGATTGGTGCCGGCCAG GGTGCAGATGATCTCCAGCGCCTCCCAGGGGTGGGCATCGTCGTACTGGGCGTGGAGCTTGAGCCACTTCATGGCGCGCTTGCGGCCTTCCTTGGGGAAG GCGTTTTCGTAGACGCCGTTCGAACAGACCAGCGCCGACCACTCGCCAGTGACGCCTTCGATGGCGTAGTTGGTGGCGGCCATGGCCACCGGCAGTGAGT CGCTGGCGCAGGTGTGCCAGCACCAGTGGCTGAGCGCGTGCAGTTCGGCCGGCACGTCTTGCGCCTGGATCTCGGCCAGGCTCACGCCGTGGGCCTCGGC
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Amino Acid Sequence |
>oxidoreductase
MKALQFDRTGDLAALKLVDMPDPLPAADEVRVEIRAAGLNPSDVKNVLGRFPYTTLPRVPGRDFAGVVVEGPKALLGQAVWGTGREPGFFRDGSHAQFLT LPAAGVALKPESLSFAQAASCGVPYSTAWDALQRSQVKAGTRLLVIGANGAVGKAALALAKALGAEAIGAVRREEQRQALETQGIAALLLGEPAELAAQV EGIFPGGAEVIFDTTGFWLEAAVPALAAFGRLAIIAAPADGHVRLPALNLYRRGGSVVGINSLLYGVEACAGFLDAFGKLFDQGRLPLPDGLREVPLEQG VEQYRAVNEGTCEKIILVP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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