Pseudomonas aeruginosa AZPAE14842, NR60_RS07020 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14842 AZPAE14842_contig_10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGTATTCGAGGAAACACTCGCCGAATTGGTTTCACTGGATGACCTGACCCTTAGCTACTACCGAGGCTGGGACAAGGACCGGGACCTCCTGGAGGTTC TGGCTTCCAGCCTGTTGCGCGACCAGCAGATGGGCCACACCCAGGCGGGACCGCAGCGTGCGGATCTTCGCATACGGTTGGCAGGTCATAACGCCGCGGA GATTCTCTCGCGCGGTCAGCAGAAGCTGGTGGTATGCGCCCTGCGCATCGCCCAAGGCCATCTGATCAATCGCGCCAAGCGCGGACAGTGCGTCTACCTG GTGGACGACCTGCCCTCGGAATTGGATGAGCAGCATCGAATGGCTCTTTGCCGCTTGCTTGAAGATTTGGGTTGCCAGGTATTCATCACCTGCGTGGACC CGCAACTATTGAAAGACGGCTGGCGCACGGATACGCCGGTATCCATGTTCCACGTGGAACATGGAAAAGTCTCTCAGACCACGACCATCGGGAGTGAAGC
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| DNA Sequence for Gene |
>NR60_RS07020
|gyrB
ATGAGCGAGAACAACACGTACGACTCTTCCAGCATCAAGGTGCTGAAGGGGCTGGATGCCGTACGCAAGCGCCCCGGCATGTACATCGGCGACACCGACG ATGGCACCGGTCTGCACCACATGGTGTTCGAGGTGGTGGATAACTCCATCGACGAAGCGCTGGCCGGTTACTGCAGCGAAATCAGCATCACCATCCATAC GGATGAGTCGATCACTGTCCGCGACAATGGACGCGGTATTCCGGTGGATATCCACAAGGAAGAAGGGGTTTCTGCGGCGGAAGTGATCATGACCGTCCTT CACGCCGGCGGCAAGTTCGATGACAACACCTACAAAGTGTCCGGCGGCTTGCACGGTGTGGGCGTCTCGGTGGTGAACGCGCTGTCCCATGAGCTGCGCC TGACCATCCGTCGCCACAACAAGGTCTGGGAACAGGTCTACCACCACGGCGTTCCGCAGTTCCCACTGCGCGAAGTGGGCGAGACCGATGGCTCCGGTAC CGAAGTTCACTTCAAGCCGTCCCCGGAGACCTTCAGCAACATCCACTTCAGTTGGGACATCCTGGCCAAGCGCATCCGCGAACTGTCCTTCCTCAACTCC GGCGTCGGCATCCTGCTGCGCGACGAGCGTACCGGCAAGGAGGAGCTGTTCAAGTACGAAGGCGGTCTGAAGGCCTTCGTCGAGTACCTGAACACCAACA AGACCGCGGTGAACGAGGTATTCCACTTCAACGTCCAGCGTGAAGAGGACGGCGTGGGTGTGGAAGTCGCCTTGCAGTGGAACGACAGCTTCAACGAGAA CCTGCTCTGCTTCACCAACAACATCCCGCAGCGTGATGGCGGCACCCACCTCGCCGGTTTCCGTTCGGCGCTGACGCGTAACCTGAACAACTACATCGAG GCCGAAGGCCTGGCGAAGAAATTCAAGATCGCCACCACCGGCGACGATGCCCGCGAAGGCCTCACCGCGATCATCTCGGTGAAGGTACCGGACCCGAAGT TCAGCTCGCAGACCAAGGACAAGCTGGTCTCCTCCGAGGTGAAGACCGCGGTGGAACAGGAGATGGGCAAGTACTTCGCCGACTTCCTGCTGGAGAATCC CAACGAAGCCAAGGCCGTGGTCGGCAAGATGATCGACGCCGCCCGTGCCCGCGAGGCCGCACGCAAGGCGCGCGAGATGACCCGCCGCAAGGGCGCGCTG GACATCGCCGGCCTGCCCGGCAAGCTGGCCGATTGCCAGGAAAAGGACCCGGCGCTCTCCGAACTGTACATCGTGGAGGGTGACTCCGCGGGCGGTTCCG CCAAGCAGGGCCGCAATCGCCGGACCCAGGCGATCCTGCCGCTCAAGGGCAAGATCCTCAACGTCGAAAAGGCGCGCTTCGACAAGATGCTCTCCTCCCA GGAGGTCGGTACGCTGATCACCGCCCTGGGCTGTGGCATCGGCCGCGAGGAGTACAACATCGACAAGCTGCGCTACCACAACATCATCATCATGACCGAT GCTGACGTCGACGGTTCGCACATCCGCACCCTGCTGTTGACCTTCTTCTTCCGCCAGATGCCCGAGCTGATCGAGCGTGGCTACATCTACATCGCCCAGC CCCCGTTGTACAAGGTCAAGCGCGGCAAGCAGGAGCAGTACATCAAGGACGACCAGGCCATGGAAGAGTACATGACCCAGTCGGCCCTGGAAGACGCCAG CCTGCACGTCAACGAGCACGCTCCGGGCCTGTCTGGGGCGGCGCTGGAGAAACTGGTCAACGAGTATCGCGGGGTGATCGCCACCCTCAAGCGCCTGTCG CGCCTGTACCCCCAGGAGCTGACCGAGCACTTCATCTACCTGCCTACCGTGTCGGTGGACGACCTGGCTAACGAGTCGGCCATGCAGGGCTGGTTGGAGA AGTTCCAGGCGCGCCTGACCGCCGCCGAGAAGTCTGGCCTGACCTACAAGGCCAGCCTGCGCGAAGACCGCGAGCGCCACCTGTGGCTGCCCGAGGTGGA ACTGGTGGCCCACGGCCTGTCCAGCTACGTCACCTTCAACCGTGACTTCTTCGCCAGCAATGACTACCGCTCGGTGTCGCTGCTCGGCGACCAGCTGAAC AGCCTGCTGGAAGACGGCGCCTACGTGCAGAAGGGTGAGCGCAAGCGCCCGATCAGCGCCTTCAAGGACGGCCTGGACTGGCTGATGGCCGAAGGTACCA AGCGCCACAGCATCCAGCGATACAAGGGGTTGGGCGAGATGAACCCTGAGCAGCTGTGGGAAACCACCATGGATCCGAACGTCCGGCGCATGCTCAAGGT GACCATCGAGGACGCCATCGCTGCCGACCAGATCTTCAACACCCTGATGGGCGATGCTGTGGAGCCGCGCCGCGACTTCATCGAAAGCAACGCGCTGGCG GTGTCGAACCTGGACGTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGGTCGGCAGACCGACCCTCATAGAAACCCCGGCCTGGCGCCGGGGTTTTCTTTTTGCGCCAGGTAGCCTGGATACGGGCGCCAGGAGTGCCTTGCCAA GGTGTGGCCGAGCCCCCGGTTGCTCGCCAGCATTGGCACCCTGGACCCTGGACCCTGGACCCTGGACCCTGGACCCTGGACCCAGGCCTCCTGGCGGCGT GGCACCGCTTCTGTGGGCAGCGGTCGCCGGTCGGTTCGGTCGATCGTTGCCAGCCGGCCTTGCTTTGCGCCTCGCGTGAAAACAAGAAGCCCCGCTATGG CGGGGCTTCTTTTATCGAATCGGCGCACAGTGCGCCTTGCAGGGGGCTTTGCGGCCCTTCACGAGACCACCGACGGCTCCGGATGGCTGACCCGCTGCTG GATGGGGCTGATCTCGGCCATGGTCTCGCTGACCCAGGCCTCGGCGCGCTGGTTTAGCTCGGCGATGGCGCGCGGGCCTTCGCCTTCGGCGTGCATCGCC
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVL HAGGKFDDNTYKVSGGLHGVGVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSNIHFSWDILAKRIRELSFLNS GVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEVFHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIE AEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGAL DIAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTD ADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLS RLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERHLWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLN SLLEDGAYVQKGERKRPISAFKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIESNALA VSNLDV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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