Pseudomonas aeruginosa 2192, PA2G_01302

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008134 transcription factor binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000156 phosphorelay response regulator activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF06506
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF06506
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF06506
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02954
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other 2192 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 333 564 5.83E-63
Gene3D G3DSA:1.10.10.60 - - - 610 650 1.7E-10
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 352 497 1.2E-14
Pfam PF00158 Sigma-54 interaction domain IPR002078 RNA polymerase sigma factor 54 interaction domain 333 499 2.4E-66
Pfam PF06506 Propionate catabolism activator IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal 37 200 4.8E-42
Gene3D G3DSA:1.10.8.60 - - - 504 568 2.1E-16
SUPERFAMILY SSF159800 PrpR receptor domain-like - - 22 195 2.48E-40
PANTHER PTHR32071 TRANSCRIPTIONAL REGULATORY PROTEIN - - 272 647 8.3E-114
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 204 299 2.79E-12
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 322 503 9.7E-63
Gene3D G3DSA:3.30.450.20 PAS domain - - 194 305 6.9E-19
Pfam PF08448 PAS fold IPR013656 PAS fold-4 211 308 1.3E-7
CDD cd00130 PAS IPR000014 PAS domain 214 304 1.72532E-4
CDD cd00009 AAA - - 334 496 6.88492E-26
SMART SM00091 pas_2 IPR000014 PAS domain 205 271 6.3E-6
PRINTS PR01590 FIS bacterial regulatory protein HTH signature IPR002197 DNA binding HTH domain, Fis-type 632 650 1.8E-5
Coils Coil Coil - - 40 60 -
Gene3D G3DSA:3.40.50.2300 - - - 22 191 2.0E-25
FunFam G3DSA:3.40.50.300:FF:000006 DNA-binding transcriptional regulator NtrC - - 325 503 1.7E-70
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 204 313 9.5E-6
SUPERFAMILY SSF46689 Homeodomain-like IPR009057 Homeobox-like domain superfamily 547 647 3.26E-10
Pfam PF02954 Bacterial regulatory protein, Fis family IPR002197 DNA binding HTH domain, Fis-type 615 647 4.1E-11
PRINTS PR01590 FIS bacterial regulatory protein HTH signature IPR002197 DNA binding HTH domain, Fis-type 615 632 1.8E-5
Gene3D G3DSA:3.40.50.10660 - - - 89 178 2.0E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.