Strain | Pseudomonas aeruginosa strain AZPAE14847 AZPAE14847_contig_42, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGACAGGGGAAGCAGGAGCAGCAGTACGAGCAGCAGGCGGCGCATGAGAACGATCCGGAGCCGGGTGAAAAGGCGGCTATTATAGGCGCGACCGTTTCC CCTGAGCCGCCGACATGCCCACCGCCAAGCCCGAAATCGTCATCACCTATTGCACCCAGTGCCAGTGGCTGCTGCGTGCCGCCTGGCTGGCCCAGGAACT GCTCAGCACCTTCGCCGACGATCTCGGAAAAGTCTGCCTGGAGCCCGGAACCGGCGGCGTATTCCGCATCACCTGCGACGGCGTGCAGGTCTGGGAGCGC AAGGCCGACGGCGGCTTCCCCGAGGCCAAGGCGCTCAAGCAGCGGGTTCGCGACCGCATCGACCCGCAACGCGACCTCGGTCACAACGATCGTCCTTCCC GCTGAACCGCTGCCGTCCGCCCATGGCTTGTTGCAGGTCAACGGGCGGCACGGCGCATAGGCATAGCCTGGGGGCATTCATCCTGTCGAAGGGAGTGCCC
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DNA Sequence for Gene |
>NR65_RS26005
ATGAGCATCATCGTCACCGGCGCCGCCGGCTTCATCGGCAGCAATCTGCTGCAGGCGCTGAACCGGCGCGGCGAGACCGACATCATCGCGGTGGACGATC TCACCGACGGCGAGCAGTTCCGCAACCTGGCGGACGCCGATATCGCCGACTACCTGGACCAGAACGACTTCCTCGAGCGTTACGCCCGCGGCGACTTCGG CACGGTCCGCGCGCTGTTCCACCAGGGTGCCTGCGCCAGCACCCTGGAAAGCAATGGCCGCTACATGATGGAGAACAACTACCGCTACAGTTGCCGCCTG CTGGAAAGCAGCCTGGAACTCGGCGTGCCGTTCCTCTACGCCTCGTCGGCGGCGGTCTACGGAGCCGGCCGGACCTTCCGCGAGGCGCGCCAGTACGAGC GGCCGCTGAACGTCTACGGCTATTCCAAGTTCCTCTTCGACCAGCGTGTGCGGCGGGCGCTGCCGCAGGCGCGCAGCCAGGTGGTCGGCCTGCGTTACTT CAACGTCTACGGGCCGCGCGAGGAACACAAGGGGCGGATGGCCTCGGTGGCCTACCACTGCTACCAGCAATTGCGCCGCGATGGGCGGGTCGAACTGTTC GGCGAACACGGCGGCTTCCCGCCCGGCGGCCACCTGCGCGACTTCGTCGCGGTGGAGGACGTGGCGCGGGTAAACCTGCATTTCTTCGACCATCCGCAGC GTTCGGGAATCTTCAACCTCGGCAGCGGCCAGGCACGGACCTTCAACGAGGTCGCCCTGGCGGTGATCAATAGCGTCCGCGCCAACGCCGACCAGCCGCC CCTGTCGCTGCAACAGGCCGTGGAAAGCGGCCTGCTCGGCTACCGCGAGTTCCCCGAGTCGCTGCGGGCGCGCTACCAGAGCCATACCTGCGCCGACCTG GAGCTGCTGCGCGAGGCGGGCTACCGCGACGATTTCCAGAGCCTGGAAGAGGGCGTCGCCGGCTACTGCCGCTGGCTGGCGCGCAGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGATCCTGCTCAGCGGCCCAGTGCCCCGCCTACCGGGGCGCGGGCGAAGCGCAGCTCCGGCAGCAGGGTCAGCAGCGCCAGTACTCCGAGGGCCGCGCC GACCCAGAGCGCGCCCTGCAGGCCGAATCCGCCGGCGATGCCCAGGCCGCCGATCCAGGAACCGGCCATCACGCCGAGCATGATGCAGGCGGTGTGCACC GAGTTGACCAGCATGTTGTTATGGCCGACCCGTGCGCCGCGGGTCACCAGCGCCGGGTTCATCGACACCCCGGTCAGGCCGATCACCACCAGCGCCGCCA CCGCCACCGCCGGAACCTGTCCGAACAGGGCGAAGGCCACCATCGCGGCGATGGCCGCCAGCAGGCCGAAGGCCAGGACCGCGATGGTATGGCGGTCGGC CAGGCGGCCGACGATGTTGTTGCCCACCAGCGTCGCCAGGCCGTAGACCACCAGCAGCAGCGGTACGGTCGAGGCGGAGAAGCCGCTGACCTCGGTGAGG
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Amino Acid Sequence |
>ADP-L-glycero-D-manno-heptose-6-epimerase
MSIIVTGAAGFIGSNLLQALNRRGETDIIAVDDLTDGEQFRNLADADIADYLDQNDFLERYARGDFGTVRALFHQGACASTLESNGRYMMENNYRYSCRL LESSLELGVPFLYASSAAVYGAGRTFREARQYERPLNVYGYSKFLFDQRVRRALPQARSQVVGLRYFNVYGPREEHKGRMASVAYHCYQQLRRDGRVELF GEHGGFPPGGHLRDFVAVEDVARVNLHFFDHPQRSGIFNLGSGQARTFNEVALAVINSVRANADQPPLSLQQAVESGLLGYREFPESLRARYQSHTCADL ELLREAGYRDDFQSLEEGVAGYCRWLARSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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