Pseudomonas aeruginosa AZPAE14847, NR65_RS24080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14847 AZPAE14847_contig_34, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGGTCCAGTTGGCCTTCCTTGGAGTCCAGTTTCCTCAATGGCCTCTGGCCGTCTATATCATCATTGCCTTCATCCTTGGTGGGTTGCTGGGACTGGCTG CCCAGCTACCGTTCCTGACCATATCGCGTGTGCGAGCCAGTAGCTTGCGCGCCGAGCTTGTACAAGCTCGTAAAGAGGTCGACACCTTGCGCGCGGAACC TTCGAAAGTTTCCTGAAACTGATATTTCTGCTTGGCTTGAAACGCGCATTTCAGCGGTAGGCGCCGGAGAGAAGGCAACTAATTGTGGGGCGTCCTGTCT ACTCAGATTCTTCATTCTATGATGAAGGACCTGCATGCCAGCACCCGATGGCCATGGAGCGCGACCCCAGCTTGTAATCTCCGAGCATGCTGTCAGAATG CGGTCCATTTGCCAGGCGGGTTTCAGGGCTTTTAGTGGCTTACCACAAAACAGTGAAGAGTATAGGTTGAACTGTGACAGACGGCATTGACTCGCGACAG
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| DNA Sequence for Gene |
>NR65_RS24080
ATGTCCAAGCGTAACGAAATCGACTTTATCGAGCTCATTCAAGGGCTTTGGGCACAGAAATGGCTCGTCCTTTCCCTGACCTTTCTAGGTGCGGTTCTGG CGGGGAGCTATGCATTTCTAAGCAAGCCTGTATACGAGGCTCGGGTTGCCGTTTTGCCGCCATCCCTTAGCGATGTTGCGGGGTTCAACATCGCGCGCAG TCGAGACAGCGGTCTTCCACCTTTTACCGTTAGCCAGGTTTACTCGGTGTTCACCCGAAATCTACAGTCCGAGGGAACGCGACGGCAGTTTTTTCGCGAG GTATATCTGCCCTCCCTTGAAGAGCGAGTGGGCTCGGTGGATGGGCTGTACAGGGCGTTTTCCGACGATGTGAGCGTGAATCAGCCGACCAAGGAGCTAC CGGAGCGGTACACCGTTGTGTTTGACCGACACGATCCTGAACAAGCTGCAAAATGGGCGAAACAATACATCGAACTGGCCGCCCAGCGTTCGATGGATGA AATGCGCGGCAATGCCCAGCGCGAGCTCGAGGTGAAGAGTCGCAACATCCAGCAGCAGATCGACACTCTACGGCAGGTGGTCAAGGAGCGACGCACTGAC CGCATCGTTCGTCTGAAAGAAGCTTTGCAGGTTGCCGAAGCTGTTGGTGTAGAAAAGCCGCCACTCATTGGTTCGCAGATCGATCAGCAATTGTCGGCCA TCATGGAAGGCAGCCTCATGTATATGAGGGGGTCGAGAGCTCTTAGGGCCGAGATAGAAGCTTTGGAGGCTCGTACATCGGATGATCCATTCATTCCTGC GCTGCGTGGTCTGCAGGAGCAACTCGCTCTGTATGAAAGCAAACAACTGAGTTTTGATAGAGTTGCGGTCTTCCGGCAGGACGGAAGCGTAGAAACCCCC GATGACCCCATAAAACCGAGAAAGGTTCTCATTCTGGCCTTAGGTATTCTGGCTGGTGGTGTACTGGGTGTATTGGCCGCCTTGCTCCGTCTCCTGTTTC GTGAGAAGCGACTCGATATAACGGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGTATTCCCGGTAGGGTAAACAAAAGGACTTGATATGCAGAAGTGAGTGGGTTTCCAGGCACGGTCTTCTCGTTGAAGAAGACCGTGCGTTGTTCTTTC TTTTCGCGGATATCAATCAGATCCCCGGCTTATAGCTGTTTCAGGAGGGGCGCTGTTCGCGAATGGCGTTATAGATATTTTCGAGTGGGGCGGTAATGCG GAAGAAGACTCTTTGTGTGTTTGGCACTCGGCCGGAAGCTATTAAGATGGCCCCAGTCACTCTGGCATTGGCTGGCGATGACCGTTTCGAGGCGCGGGTG TGCGTTACCGGGCAACATCGCGAGATGCTTGATCAGGTCCTAAATCTCTTCAAGATCGTCCCTGACTTCGATCTCAATATTATGCGTACAGGTCAGGATC TGACTGATATCACTGTCGCCATTCTGCAAGGAATGAAAGAGGTTTTCGCCCAGTTCAAACCCGATATTATCCTTGTCCACGGCGATACAGCCACCACATT
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| Amino Acid Sequence |
>chain-length determining protein
MSKRNEIDFIELIQGLWAQKWLVLSLTFLGAVLAGSYAFLSKPVYEARVAVLPPSLSDVAGFNIARSRDSGLPPFTVSQVYSVFTRNLQSEGTRRQFFRE VYLPSLEERVGSVDGLYRAFSDDVSVNQPTKELPERYTVVFDRHDPEQAAKWAKQYIELAAQRSMDEMRGNAQRELEVKSRNIQQQIDTLRQVVKERRTD RIVRLKEALQVAEAVGVEKPPLIGSQIDQQLSAIMEGSLMYMRGSRALRAEIEALEARTSDDPFIPALRGLQEQLALYESKQLSFDRVAVFRQDGSVETP DDPIKPRKVLILALGILAGGVLGVLAALLRLLFREKRLDITG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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