Pseudomonas aeruginosa AZPAE14847, NR65_RS03770
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14847 AZPAE14847_contig_3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTGTCGCCCCGCCTTAGATTGGCGAGAAGCGCGGCCAGGCCGATTCGATCGGCCTTGGCGCCGCTGGCAGTGTCTTCGAACACTCGCTCGCAACCCGCC TTGGCCATCGCATCGCGTTGCAGGTCCAGTAGTTGATCGTCGGTGGAAATGCGCACGTACCCAATCAGCATGATTTCGTTCAGAAATGCGCGAAAGGCAG CATAGGTGAATTTTGAAAGCGAGAAATCGTTACTGGACTAAAAGTACGCGGTTTCTGGGGGCGGCCAAGGGGAACGAGGCTGGCGTCCAGAAAACGGTCG TCTGATGGACGCTTCCACGAACGGAGCGATACCGCAAAGGGAAGAATGGAGTGCAACCATCGTAGAGCTTCAAACTGAGATATTGCAGTTGATTGCCGCA TCTGGCCGGCCTATTGCCGTGCATTTTCTACCTACTACTGCATCGCTCAAGAAGGTTCTGTAAATATATTGGTTCAACTCTTTCGATAGGAAAGCCATTC
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| DNA Sequence for Gene |
>NR65_RS03770
ATGACAAATAATAGTGCGCCACCACTTGTCGTGACCAGAGGAAATGATAATGGTTACGAGCCTGGGTCGATGGTTATTACGCATGTACAGGCTCGTGGGC TAGACATAATCCAGTACATTCCAGGTCGGTCAAGCTACGGTACTCCACCATTTGTCCCGCCAGGACCAAGCCCGTATGTTGGCCCTGGAATGCAAGAGTA CAGGAGGCTAAGAGATACTCTTGATAAGTCCCATTCAGAACTCAAGAAAAACCTGAAGAATAAAACCTTGAAGGAGGTGGATGAACTCAAGAGTGAAGCG GGGTTGCCAGTTAAAGCGGTCAGTGCCAATGACATCCGCGATGAAAAGAGTATCGTTGATGCACTCATGGATGCCAAAGCAAAATCGCTAAAGGCCATTG AGGATCGCCCGGCCAATCTTTATACGGCTTCAGACTTTCCTCAGAAGTCAGAGGCGATGTACCAGAATCAGTTGCTAGCCAGTCGAAAGTTCTATGGAGA GTTCCTTGATCGACATATGAGTGAGCTGGCCAAAGCGTACAGCGCTGATATCTATAAGGCGCAAATCGCTATCTTGAAACAAACGTCTCAAGCACTGGAG AGTAAAGCCCGGTCAATGGAGGCGCAAGCCCAGCAGGTCACTCAACAGCTCGGTGCCGACTTCAACGCGATCACCACTCCGACCGCCACCAAGGTCCAGC AACGTGTGAAAGCAGTGGATGCTAGTCTGTCTCAGGTTTCCACCCAGGTCAGTGGTGCAGTCGCCTCGGCAACCCAGGCGGTGCAGGTCAAGACAGCGCA AGCCCAGCAACAAGCCAACAGCCAGATTTCGTCCAGCCAGAACCTGATCAGCGCGGCATTTCGGAATCAGATTGCCTTGGCAGCACAGGCCAGTGGAGAA GCCCAGGTCACGGCTTTCAACACCAAAGTCAAGCAGATCGTCAACGAAGCCACGGCGTTTTCGACAGCACGAAAACAAGCGCTGGCTCAGTTTGCTGCCA ATGCGGCCGCCGAGGTCGAAACCGAGGTCAACAGGCTAACCGCCCAGGTCAAGGCAAGCCCCACCAAGGCGGCTTCGCAAGCTGCACAAGCAACCCTTCG ACAATTCACTGAAAGCACCTATGCCAAGGTGAACACCTATGCCCAGCAGACCGAAGCAGAGCTGCAGGCCAAAGCCAAGGAGGTTTCGGCAGCGGTAGCC GAGGCACAGCGTGCGGCGACCAACGATTTGCAAAAAACAGCCGATGTAGTACCAGGTCAGATCATCCAGGCTGCGAACACCTTGGCGATGCCGGCTACCT CTACGCCGCTGGTTTCGGTGGCCGGGTTTGGTAGTGCGGCAGTGGAGACGGCTCGCCTGGCGGCTTCCCTAACGAATGCTGTCAATCGCCTGGTTCAGAT TGCTGGTAGTGGACCCGGCGCATACGTTGCCACCTTCGCGGTGCTGTCGCTGTATTCCGACCAGGCTGGTAAAGACAGTGACAAGGTTCCTGCCGGCGTT CGCAATGCATTGGCACTGGAGGCGTCCGCTCTGGGGCTTCCTGGCACGGCTGATTTGCAAAGCGTCGCCAAGGCAGGTGGCACGGTTGATATGCCGGTAC GACTCACGAGTGCTGCACAAGAGAGCCCGAGTGGTAAATCGCAGATTGCCGCGATGTTGACCAACGGTGCAACTGTCCCCAAGGGCGTGCCTGTTCGCGC CGCGACCCTCAATGCTGCGACGGGCCGGTATGAGGTGACGGTTCCCGCAAAGTCCACCGTGCCGAATACACCACCGCTGATCTTGACCTGGACCCCTGCC ACCCCTCCAGGAAGCCAGAACCCCTCAAGCACCACTCCGGTCGTACCGCAGCCGGTTCCGGTGTATGAGGGAGCAACGATCACCCCAGTACAGGCCGAGC CGGAGTCCTATCCGGGAGTGCCGTTAGATCTGGACGATCTGATCGTGATCTTCCCGGTGGGCTCGGGGGTTAAGCCAATCTATATAATGTTCAATCATAA CCCTCATGATGTTGTTATTGATGATAAGATCAGAGAGCAAATTCCAATTAGAGGGTGGACTGAGGTTGAAATTAGAGATGTTATCGGAAAAGGTGCAACA GGTAGTTCTTCAGATAAGCGTCGGCCTAATAAGACGATAGATGGGCTGGGGCGGAATGACTCTGCAACAGTATATGGAAGTCCTCCTAATGGATATATAG TTGTGAACGATAGGACAGGTGAAATTATTCAAATTGCAGATCGGAACGATTCCGCATGGGCGGTTGACGGGCGAATCATCTGGAGAAATAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGATCAATCCTAACTCTGTCGAAATAGTTGACAATGGCCTAGATTTTTTTTCAAAAGAAGGCAATGGGAAGATGTGGCTAACTACGAAGGCAACTCTGGA AGTCGTATCTTTGGCAACTAAAAAAGGGTTGGCAATTTCAAAAATTGAGGGATTCATCTGGCATAAGGATGTAGGGAGGTTCGAGGCAAGACTTGATGCC ATATTTGAAGGGCTTGTCAATCCAGTAAAAGTGCCTGATGATGTCAATAATAATAACACTAGAGCGAAAGAGAGTACAGAGGAAGATGCTTCTCTTGGGC ATGATGCTTTTATTGTAACAATTGCCTCCAGAAAATAAAGGTGGAAACCTTGGGGCTGAGTTGGCTTGCAATCCCTTGCATGGACTACAAACAATATAGG CTCAGCTCCCTTAGGGATGGTCTGAAGTAGCCATGTCTTTCTGGCCGACTTCAGCCCCCGGCGAATTTGAAAGCGGAGAATCGATTAAAAACGATCCGAT
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| Amino Acid Sequence |
>pyocin protein
MTNNSAPPLVVTRGNDNGYEPGSMVITHVQARGLDIIQYIPGRSSYGTPPFVPPGPSPYVGPGMQEYRRLRDTLDKSHSELKKNLKNKTLKEVDELKSEA GLPVKAVSANDIRDEKSIVDALMDAKAKSLKAIEDRPANLYTASDFPQKSEAMYQNQLLASRKFYGEFLDRHMSELAKAYSADIYKAQIAILKQTSQALE SKARSMEAQAQQVTQQLGADFNAITTPTATKVQQRVKAVDASLSQVSTQVSGAVASATQAVQVKTAQAQQQANSQISSSQNLISAAFRNQIALAAQASGE AQVTAFNTKVKQIVNEATAFSTARKQALAQFAANAAAEVETEVNRLTAQVKASPTKAASQAAQATLRQFTESTYAKVNTYAQQTEAELQAKAKEVSAAVA EAQRAATNDLQKTADVVPGQIIQAANTLAMPATSTPLVSVAGFGSAAVETARLAASLTNAVNRLVQIAGSGPGAYVATFAVLSLYSDQAGKDSDKVPAGV RNALALEASALGLPGTADLQSVAKAGGTVDMPVRLTSAAQESPSGKSQIAAMLTNGATVPKGVPVRAATLNAATGRYEVTVPAKSTVPNTPPLILTWTPA TPPGSQNPSSTTPVVPQPVPVYEGATITPVQAEPESYPGVPLDLDDLIVIFPVGSGVKPIYIMFNHNPHDVVIDDKIREQIPIRGWTEVEIRDVIGKGAT GSSSDKRRPNKTIDGLGRNDSATVYGSPPNGYIVVNDRTGEIIQIADRNDSAWAVDGRIIWRNK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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