Strain | Pseudomonas aeruginosa strain AZPAE14847 AZPAE14847_contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAAGACCACCACCAGCCAGGCCGGGAACAGGATCACCCGCCAGTCTCGTGCCTGTTCGTAGCGCATCTGGCCGGCGACGAAGAAGCTGTGGTGGTCGCCG GTATGGCGCTTGTAGAACATCCGCCCCAGCGGGTGCTTGTGGTGGCCGAGGGACTTGTGGATGCGGTACTCGCCCCAGTTGAAGAACACCAGCGCGGCCG GCACCGTCAGCCATTCCAGCAGGCTCGGCTGCTCGAGCCGGGAGAGGAAGAAGACGATCCAGGCGCCGCCGTAGGCGAGGACGAAGCCGGCGTGCAGCCA GGGGTTGTAGCCGGGCCGGATGGCCGCGCGGTACTGCTGGCGAAAGGGTTGGGGATCGAAGGACATGGTCGGCATCTCGCGTGTGATTGTTATTGGCTGG GCCGCGAACCGGGCCGATCCGCCGGGGCGGAAGAGCTTGCATTCGAGTGTAGCGATGCCAGTCTTATCAGGGTAATGGATAAATAGAATGAGGATTATTC
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DNA Sequence for Gene |
>NR65_RS02525
ATGAAGCTGAACTTGCAGCAGCTCGACCTCAACCTGCTTCTGGTCTTCGATGCCCTGATGCGCGAACGCAACCTGTCGCGCGCGGCGATCCGCCTGCATC GCAGCCAGCCGGCGGTGAGCAACGCCCTCGCCCGCCTGCGCGAACAGCTCGACCAGCCGCTGTTCCGGCGCACCGCCAAGGGCCTGGAACCCACCGCCGC CGCCCTCGCCCTGTACGTGCCGGTGCGCCAGGCCCTGCATCTGCTGCAGGCCGGCCTTGGCTCCCAGGAAACCTTCGATCCGCACACTGCGCGGACCTTT CGCCTGACGATGAACGACTATGCCCAGTTGCGCCTGCTGCCGGGCCTGGTGACCCGCCTGAAGACCCTGGCCCCGCGGGTGACGCTGGAGGTACGTCCCG ACGAAGGCGCCTCGATCCCGGCGCAACTGGCCAGCGGCGAACTCGACCTGGCGATCGACTACCTGTACTTCGACGAGCCCGAGCTGGCCTACCGGCCGGT CGGCGAGGAACGCCTGGTGGTGATCGCCCGGCAGGGCCATCCGGCCTTCCGCGGCGGCCTCGACCGCGCGGCCTACGAGGCCGCGCAGCACGTCTCGATC CTGCCGCGGGTCGGGCGCGGCAGTCCGCTGGAGATCGTCCTCGGCTCGGCCAGGGTACAGCGCCAGGTGCAATTGCTGGTGCCTCACTACCTGACCATCC CGGCCATCGTCGCCAGCACCGAGCTGCTCGGCACCGTGCCACGCCGCCTGGCCGAGCGCTTCGCCAGCAGCCATGGTTTGCAACTGGCGGACGTCCCCTT CGAGATGGCCCCGGTGCAGGTCAACCTGATCTGGCATCGCCAGCAGGAAGCGACGCCCGGCCTGCAATGGCTGCGCGAGCAGATCGTGCAGATCGAACAG GGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCATAGGTTGCGCGCGAGGATCAGTCTTCCGTCACTTTCGATCATTGAGCGAGGCCTTTCCCGCAACCTATGGTGAGGCTCCGCCCCGCAACCGGCCCC AGGCCGCCCCGGGGATACAGTCCAGCACCCGCCAGAGGAGCCACCGTATGACCAGCCTGCCGCTCGAAGCCAACGCCGCCGCCACCCTCGCCGAATGGCA CGGGCTGATCGCCCGCCGCGACCTCTCCGGGTTGCCGCGCCTGCTGCACCCCGACGCCGTGTTCCGCTCGCCGATGGCGCACAAGCCGTATGCCGGCGCA CCGGTGGTCTCGATGATCCTGAATACCGTGCTCACGGTCTTCGAGGATTTCGCCTATCACCGCCAGTTGGCCAGCGCCGACGGCCGCAGCGTGGTGCTGG AATTCAGCGCACGGGTCGGCGAACGCGAACTGAAAGGCATCGACATGATCCGCTTCGACGACGACGGCCGGATCGTCGACTTCGAAGTGATGGTCCGTCC
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Amino Acid Sequence |
>LysR family transcriptional regulator
MKLNLQQLDLNLLLVFDALMRERNLSRAAIRLHRSQPAVSNALARLREQLDQPLFRRTAKGLEPTAAALALYVPVRQALHLLQAGLGSQETFDPHTARTF RLTMNDYAQLRLLPGLVTRLKTLAPRVTLEVRPDEGASIPAQLASGELDLAIDYLYFDEPELAYRPVGEERLVVIARQGHPAFRGGLDRAAYEAAQHVSI LPRVGRGSPLEIVLGSARVQRQVQLLVPHYLTIPAIVASTELLGTVPRRLAERFASSHGLQLADVPFEMAPVQVNLIWHRQQEATPGLQWLREQIVQIEQ G
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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