Pseudomonas aeruginosa AZPAE14847, NR65_RS18240

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14847 AZPAE14847_contig_19, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTGCAGAAGCTCGAGGACGAGGACGACGGCAGCGTCTACTACACGCGTATCGCCTGCAAGCTGCTCGACCTGCAAAGCTGCCGCTGCACCAACTACGCC GAGCGCATCCGTTTCGTCCCCGACTGTATCCAGCTCACCCCGGCGCAGGCCGACGAGTTCCAGTGGTTGCCGCCGACCTGCGGCTATCGCCTGGTTGCCG AAGGCAAGGACCTGCCGCTCTGGCACCACCTGGTCTGCGGCGACCCGGAGCGGGTCCACAAGGAACGCATTTCCCAGTCCGGGCGCATGCTCAGCGAGAC CCAGGTGGCCGAGGACGACTGGGAGGACTACCTGATCTTCCGCGCCGGCTGAGCTCGCGTCCGTCGCACTTCCTTACCTTGTGAAATGATATGTATTATC ATTCGCATATTTGCAAGGGACTTCCGTATCCGACGGAAGCGGGGAGGCGAGGTGTTGCAGCGGGTCAACGGCGCGGGGGGCGCCGCCGGAGGATGCACGG
DNA Sequence for Gene
>NR65_RS18240
ATGGATGAGCGCTTCCGTGGTTCCGTCTCGCATGCCTATCAGGCGTTCCATGGCGAGTTGCTGCGCTTCCTGCGCAAGCACCTGGGCAGTTCGGCGGACG CCGCCGACCTCGCCCAGGATACTTTCGCCCAGTGGCTGAAATGGCCGGGCCGGCAATCGGTCGAGCAGCCGCGCGCATTTCTTTTCCAGATCGCCCGCAA CCTGTTGCGCGACCATTGGCGCCGGCAGCAGAGCCGCGGCCAGGATATCGACCGGCCGGCGGCGAACGACGAACCCGCCGCGCTGGAAGGCGAGGCGGCC GGGCCGGGCGAGCGTTTCGAACAGCAGCAGCGCCTCAGCCACCTGGCGGCCGCGCTGGCCGAGCTGCCGCCGCGGCGGCGCGAAGCGTTCGTCCTGCACA AGTTCGACGGCCTGTCCCAGGTCGAAGTGGCCGAGCGCATGGGAATCTCCCTGAGCATGGTGGAAAAGCACATCGCCAGCGCCTTGCTGCACTGCAAGCG GCGGCTTGGCCAGGGAGGCGAAGGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCCGCTGGAACGACTGGAACCGCTGTTCGCAGACGAAACCGAAGAGGACATCGATCACCGCGCCGCCTACTGGTTCAGCCGGCGTCGTTCCGGGCATTT CAGCGCTGCCTGCCGGGCCGAGCTGGAGGATTGGCTACGCGCCGATCCGCGCCATCGCGAAGCGCTCGAGGGCATGGAGCGGCTCTGGCGCGAGTTCGAC GGCCTGCCGCGCCCGGCGCTGGACGATATTCCCGAGCCGGTGCCGGCCTGGCGCCTGCCCCGGGCGCTGGCGGCGGCGTTCTTCGTATTCTGCGCGCTGC TCGTCGCCACCCTGTTCTGGCGCGACCAGTCGCTCGGACCGAACCTCGCCTACGGCACGGCACCTGGCGAGCAGCGCGAGGTGGTCCTGGCGGACGGATC GAAGCTGTTCCTCGACGTCGATACCCAGGTGCAGGTGCGTTACGCCGAGCGCACCCGCGACGTGCTGTTGAAGAAAGGCGAGGTGTTCTTCGTGGTCAGC
Amino Acid Sequence
>RNA polymerase sigma factor
MDERFRGSVSHAYQAFHGELLRFLRKHLGSSADAADLAQDTFAQWLKWPGRQSVEQPRAFLFQIARNLLRDHWRRQQSRGQDIDRPAANDEPAALEGEAA GPGERFEQQQRLSHLAAALAELPPRRREAFVLHKFDGLSQVEVAERMGISLSMVEKHIASALLHCKRRLGQGGEG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site