Strain | Pseudomonas aeruginosa strain AZPAE14847 AZPAE14847_contig_19, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCCAACTGTTCGACGAGGACATGGAACTGGAGTCGCTGCTGCGCCTTGCCGCCGCGGCGATCTCCCGCCTGCAGACCCATCAGTTGTCGAGCCTGGCGC AGACCAGCACCCTGCCGGATGGCACCCAACTGGCGACCTGGCAGATGGAGGTGCCCATGCGCCATCAGCACTCGGTGGTACCGTTGCAGGTGAAGTTCCA GGAAGAACAGCGCAAGACCGGCGAAGAGGCCCGCGAAAGCCTCTGGCGCGTCGAACTGGCCTTCGACCTGGAGCCGCTGGGACCGCTGCACGCCCAGGCG ACCCTGCTACGCGGCAGCCTGTCCAGCCAGCTTTGGGCCGAGCGCGACGCGACCGCGCGGCTGGTCGAGCATGAACTCGGCCACCTGCGCCAACGCCTGC GCGACGCCGGCCTGACCGTTGGCGAGATCACCTGCCAACGCGGCCGCCCGCCCCAGGGCCCGCGAGCGACCATCGAACAACGCTGGGTAGACGAAACCGC
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DNA Sequence for Gene |
>NR65_RS17960
ATGAACAGAAAGCAGTCACCCGCCCCGCGCCAGGCCATCGCCCTGAGCTACGACGGCCAGGCCGCGCCGACCCTTTCCGCCAAGGGCGACGCCGAACTGG CCGAGGCGATCCTGGCCATCGCCCGCGACTACGAGGTACCGATCTACGAGAACGCCGAGCTGGTCCGCCTGCTCGCCCGCCTGGAACTCGGCGACGCCAT TCCGGAAGCGCTGTATCGCACCATCGCCGAGATCATCGCCTTCGCCTGGCACCTGAAAGGCAAGTGTCCCGAGGGATTCGCGCCGGACGCCGCGGATGGC AACCAGATGCTGCTACTCGGCGGTCCCGGCGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCCAGCCCGCACGGCGAAACATCCGCACGCACATCAGCTCCAGGACCTCGCCGCTGCGCGCTAAGCTGCGCAGCCTCCGACCTCGGCAAAGGAGCGCCC GATGAACTTCGTCTTTCCCCACCCGTTGGACACCCCGCGCCTGCGGCTACGCACTTTCCGAGAGGAAGACGCCGCGCCGCTGTTCGCCATGATGTCCGAC CCGGAAGTCATGCGTTACTGGAACACACCGCCGTGGACGACCCCTGCGCAGGCCCGCGAGGCGATCCTGCGGGACAGCCAGGCGCTCGTCGACGGCGAAT ACCTGAACCTGGCCATCGAGCGTCGAGAAGACGGCCAATTGCTCGGCAGTTGTATCCTCTTCCATTTCGAGAAAGGCTCGCGCCGCGCCGAACTCGGCTA CTGCCTGGCACGTGCAGCCCAAGGCCGGGGTTACATGGGCGAGGCGCTGCGCAGGCTGCTGGCGTTCGCTTTCGATGAAATCGACCTGAACCGCCTGGAG
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Amino Acid Sequence |
>FlhB
MNRKQSPAPRQAIALSYDGQAAPTLSAKGDAELAEAILAIARDYEVPIYENAELVRLLARLELGDAIPEALYRTIAEIIAFAWHLKGKCPEGFAPDAADG NQMLLLGGPGD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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