Pseudomonas aeruginosa AZPAE14847, NR65_RS13165

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14847 AZPAE14847_contig_13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCGACCGCAGCCTGGAACGCGGCGCCGACCAGGTGATCGCCTGGAGCCTGTACTCGGGCGACCAGGAAAGCCGTTTCCCCGGCGCGCAGGACAAGGGCC TGACCTGGAATGTCGGCGATCCGCTGAAAATCATGCTGCGCTGGGCGAAGAACGGCTCGCAGCGTCCGGCAGACGACCCGCGCCAGGCCAGCCTGGCGGT GGCCGACCTCGAGGCCGGCTGGAGCTACCAGGGCTCCTGGGCGCTGTTGCGCATGATGCGCGCGCACTTCTCCCGGCAGCGCCCGCCGAACGTCGACTAC ACGGAGTTTCCGCTGGTCCTGCAACTGCCGGTGTATGCGCCCTACAGCCCGGAAAACGAGGCGCGGATGTTCTTCCGCCTGTCGTTGATGAGCCTGGGCG GCAAGACCCCGCTGTCCATCCAGCCGCTGCCGGTGCGCGCGCCGCAATCGCCGTTCGCGACGCTGTTGCCGGCCACCGTCGCCAGCACCGGAGGTACCCC
DNA Sequence for Gene
>NR65_RS13165
ATGACCCTGCCTCTTTCCGGCAACGCCCTGTCCCTGGAAGTGCTGCTCGAACCGATCGACCCCGGACAGCCGTGCGGCCCCAGCCTGCGCTACGACCCGG ACTACGACCGCCTGCGCGAGTTGCGCCGGGAGGACGACAGCAGCCTGCCGACCGGCGTCTGGCAAGCGGAGGCCAAGCGCGCCGACTGGGCCGCGGTGGA GCAGTTGGCCAGCGAACTGTTGCAGCGGCGCAGCAAGGACCTGATGCTCGCCGCCTGGCTCGGCGAGGCCTGGCTGCAACGCGGCGGGCTGGGCGGATTG CAGCGCGCGCTGGTGCTGCTGGCGGAACTCTGCGAGCGCTACCCCGAGGAGGTGCATCCGCAAGCCCAGGACGGCGACCAGTCGTGGCGGGTGCCGCCCA TCGACTGGCTGTTGCGCCGCTATGCCGAGCTGCTGCACACGCGCCTGCCGCTGATGGGGCAGGGCGCGTTCGCCGAGATCACCCTCTATGCCTGGCAGAG GTTGCAGCGCCAGCAGGTCGCCAGCGGCGACAGCAAGAGCGCCAAGGCGGCGCTGGAAGCGGCGCAACTTCAGCAGAAGAAGCTCGACGAAGCGTTGCGC GCGGAGCCCCTGGTGCAATGGCAGCGCAAGCAGGCCAGCCTGCTCGCCTGCCAGCAGCAACTGCAACGCCTGGAACAGTGGTGCGACCGCTGCCTGGGCG AACTCGCCCCCAGTTGCCAGCCGCTGCGCGAGGTCATCGCGCAATGGCTGGCCTTGCTCAAGGAGTTCATCGCCATGCACCCGCAAGCGCCGCTGCCCGA AGAACAGCCACCGGTCGCGGAGGCGGACGCCGCCGAAGGCGACGTGGACGGCGAGGAAAGCGTCCCGGCGAGCGCGCCGAGCGGACCGGCTGGCGCGCCG ACCAGTCGCGAGGACGCCTATCGGCAACTGCTGCTGATCGCCGACTACCTGGCGCGCACCGAGCCGCACAGCCCGGTTCCCTACCTGATCAAGCGCGCGG TGGAATGGGGCAACAAGCCGCTGAGCGAGTTGCTGGCGGAGCTGATCAATGCGGACTCGGAGGCGCGCCGAGTCTGGTCGCTGCTTGGCGTACTGCCCTA G
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGGCGTGGCTATATCTTTTATTCGAATATATAAATACGAATTCAGAATTTTTTAATCTATGGGTTCCTGGGGCAAGATGGGCGCACATTCCCCGGCTCG GAACCCAGCATGTCCGTCATCACCCATCCCCACGCCCGCGAGCTGACCAAATCGGTGCGCGCCACCGTGCTGGTGTTCAACGACCCCCGTTCCCGCGAGC TGCTGGAGCGCATCGAGCGCCTGGCGCCCAGCGAGGCCAACGCGCTGGTCATCGGCGAGACCGGCACCGGCAAGGAGCTGGTGGCGCGCCACATCCATGC CCTCAGCGGACGCTGCGGCGGCCCGTTCGTCGCGGTCAACTGCGGTGCCTTCGCCGAGAGCCTGGTGGAGAGCGAGCTGTTCGGCCACGAGAAGGGCGCC TTTACCGGTGCGTTGCAGAGCAAGGCCGGCTGGTTCGAGGCGGCCAACGGCGGCACCTTGTTCCTCGACGAGATCGGCGACCTGCCGCCGAGCATCCAGG
Amino Acid Sequence
>type VI secretion protein
MTLPLSGNALSLEVLLEPIDPGQPCGPSLRYDPDYDRLRELRREDDSSLPTGVWQAEAKRADWAAVEQLASELLQRRSKDLMLAAWLGEAWLQRGGLGGL QRALVLLAELCERYPEEVHPQAQDGDQSWRVPPIDWLLRRYAELLHTRLPLMGQGAFAEITLYAWQRLQRQQVASGDSKSAKAALEAAQLQQKKLDEALR AEPLVQWQRKQASLLACQQQLQRLEQWCDRCLGELAPSCQPLREVIAQWLALLKEFIAMHPQAPLPEEQPPVAEADAAEGDVDGEESVPASAPSGPAGAP TSREDAYRQLLLIADYLARTEPHSPVPYLIKRAVEWGNKPLSELLAELINADSEARRVWSLLGVLP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site