Pseudomonas aeruginosa AZPAE14877, NR93_RS05040
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14877 AZPAE14877_contig_5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGGAAAAGGTCGAGGTCTACAGCTACGAGCTGCTGGCCTACCGGACCCTGGTCAACGCCCAGGCCCTGCCGGACAGCGACGACCCGGCGCGACGCCTG CCGGACTACTTCATCACCGCCGACAGCGTCACCCCGGCGCAGCACGTGGACATCCAGGCGGCGGCGCAGAAGTGGGTCGATTCGTCGATCTCCAAGACCG CCAACGTGCCCACCGACTACCCGTTCGAGGGCTTCAAGGACATCTACCGCTACGCCTGGCACCAGGGACTCAAGGGCTGCACCACCTTCCGCTTCAATCC CGAGGCGTTCCAGGGCGTGCTGGTCAAGGAGTCCGACCTGGAGAAGACCCGCTACCGCTTCGAACTGGAGGACGGCAGCGTGGTGGAGTTCAAGGGCAAC GAGCAGGTCGAGTACGACGGTGAGATCCATACCGCCGCCAACCTCTTCGACGCCTTGAAAGAAGGCTATTACGGCAAGTACTGAGGCCGGGGGAATCGAT
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| DNA Sequence for Gene |
>NR93_RS05040
ATGTCAGCAGTCAAGATCACGCAGAAGATCAAGGGCTTCAAGGTCGTCAACGAAGCCGAGGAGCAGGCCCTTGCCGCCGCCGCGGAAGCCGCGTCGGTGG TGCAGATGGACGAGACCCTGGAGCGCCCGGATACCCTGATCGGCGCCACCTACAAGATCAAGTCGCCGCTGTTCGAGCACGCGCTCTACGTGACCATCAA CGACATGGTCCTCAACGCGGGCACGGCGCACGAGCAGCGGCGTCCCTTCGAGATCTTCATCAACTCGAAGAACATGGATCATTTCCAGTGGATCGTCGCA CTTACCCGCATCATGTCCGCGGTTTTCCGCAAGGGCGGCGACTGCACCTTCCTTGTCGAGGAACTCAAGGCGGTATTCGACCCGCGCGGGGGCTACCTGA AGAAAGGCGGCATCTACATGCCTTCCATCGTCGCCGAGATCGGCGGCGTGCTGGAGCGCCACCTGACGGCCATCGGCTTGTTGCGTGGCCCTGAACTGGA CGAGGAACAGCGCCTTTTCCTCGCGGAAAAACGCGCCGCCTACGAGGCCGCCCAGGGCACCAGCAAGGTCGAGCCGGGCGAAGGCTTCCCCGCCGGCGCG CAACTGTGCGGCAAGTGCAACAGCATGGCGGTGGTACAGATGGACGGCTGCGCCACCTGCCTCAACTGCGGACACTCGAAATGTGGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCACTTGAAAAACGCATGCGTTTTTCAATGCGAACGACCGGCCAGGATGGCCGGGCCGGGGGTGGGCTGAACGACGAAGCCTCGACAGGATGTCGGCTCG GCCTCACTCCAAGACGCCGAACCGCATGGTTTTTGAAGGGCGAACGGCCGCAGGACGGCCGTGCTCCTGTGGTTCCTGCCTACAACGCAAACGGCAAATG AATCTCCACGTTCTGCCGTTGCGCCAGGCGCATCTCGAACTCCGCCGGATCATGGATCAGCACGTCCTGTCCGGCGAACGCCTCGGCGGCGATCAGTCGC GACAGCCAGAAGCGCACGCAGGCGACCCGCAGCATGCTCGGCCAGTGCTCGGCTTCCAGCGCGGTGAACGGCCGGCGGTTGGCGTAGGCGGCGAGCAGGG CGCGGGCGCGGGCCGGGTCCAGGCTGCCGTCGGTATTGGAGCACCAGTCGTTCAGGGTGATCGCCAGGTCGTAGAGCATCCAGCCGGAGCAGGCGTTGTA
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| Amino Acid Sequence |
>NrdJb
MSAVKITQKIKGFKVVNEAEEQALAAAAEAASVVQMDETLERPDTLIGATYKIKSPLFEHALYVTINDMVLNAGTAHEQRRPFEIFINSKNMDHFQWIVA LTRIMSAVFRKGGDCTFLVEELKAVFDPRGGYLKKGGIYMPSIVAEIGGVLERHLTAIGLLRGPELDEEQRLFLAEKRAAYEAAQGTSKVEPGEGFPAGA QLCGKCNSMAVVQMDGCATCLNCGHSKCG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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