Strain | Pseudomonas aeruginosa strain AZPAE14877 AZPAE14877_contig_3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TACAACCCCAACATGAAATTCCTGTTCATCTACGTGGTGCTGTTCCTGGTCGTGCTGCTGGTGCTCTACATCAAGCACCGGCTGACCCGGATGCCGGTCG GGCGCGCCTGGGAGGCGCTGCGCGAGGATGAGATCGCCTGTCGCGCGATGGGCCTCAACCATGTGCTGGTGAAACTCTCGGCGTTCATGCTCGGCGCCTC CACCGCGGGACTGGCCGGGGTGTTCTTCGCCAGCTACCAGGGCTTCGTCAACCCGTCCTCGTTCAACTTCTTCGAGTCGGCGCTGATCCTCGCCATCGTC GTGCTCGGCGGCATGGGCTCGACGGTCGGGGTGGTGATCGCCGCCTTCGTCCTCACCGTGGCGCCGGAGCTGCTGCGCAGCTTCGCCGACATCCGCGTGC TGCTGCTCGGGATACTCATGGTGGTGATGATGATCTGGCGGCCGCGCGGGCTGATCCGCATCAGCCGGGTGGGCTTCGCCCCGCGCAAGGGGGTGGCGCC
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DNA Sequence for Gene |
>NR93_RS02805
ATGAGCGACAAGATCCTCAGCGTCGAGCACCTGATGATGCACTTCGGCGGCATCAAGGCGCTCAACGACGTCAACCTCGACGTCGAGCGCGGTTCGATCA CCGCGCTGATCGGCCCCAACGGCGCCGGCAAGACCACCGTGTTCAACTGTCTCACCGGCTTCTACAAGGCCACCGGCGGCAACATCCTGCTCAACACCCA GGGGCGCACCACGGACGTCATCCAGGTGCTCGGCGAGCCGTTCCAGCTGGACGACTTCGTCAAGCCGCCGCAACTGGGCAGTCGCCTCTACTACAAGATG TTCGGCGGCACCCACCTGGTGAACCGCGCCGGGCTGGCGCGGACCTTCCAGAACATCCGCCTGTTCAAGGACATGTCGGTGGTGGAGAACCTGCTGGTGG CGCAGCACATGTTCGTCAACCGCAACCTGCTCGCCGGCATCCTCAACACTCCCGGCTATCGCCGCGCCGAGAGCGAGGCGCTGGACCACGCGTTCTACTG GCTGGAGGTGGTCGACCTGGTGGACTGCGCCAACCGCCTGGCCGGCGAGATGTCCTACGGCCAGCAGCGGCGCCTGGAGATCGCCCGGGCCATGTGCACG CGGCCGGAACTCATCTGCCTGGACGAACCGGCCGCCGGCCTCAACCCGGCCGAGACCCACGCCCTGAGCAACATCGTCCGCTACCTGCGCGACCACCACG GGATCACCGTACTGCTGATCGAGCATGACATGGGCATGGTGATGAACATCTCCGACCACATCATCGTACTCGACCACGGCGACGTGATCGCCCGTGGCAA CCCCGAACAGATCCGCCATGACGAGAAGGTGATCGCCGCCTATCTCGGTGCCGACGAAGAGGAGCTGTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCGGCGTTGCTGGAATTCCGTGAGGTGGACGTGTTCTACGGGCCGATCCAGGCGCTGAAGAAGGTCTCGCTGCAGGTCAACGAGGGCGAGACGGTGAG CCTGATCGGCGCCAACGGCGCGGGCAAGTCGACGCTGTTGATGTCGATCTTCGGCCAGCCGCGCGCGGCGGCCGGGCAGATCCTCTATCGCGGCCAGGAC ATCCGCCAGAAGTCGGCGCACTACGTGGCGTCCAACGGCATCGCGCAGTCGCCGGAAGGACGCCGGGTGTTCCCCGACATGAGCGTCGAGGAAAACCTGC TGATGGGTACCATTCCCATCGGCATGGACCACGCCGAGGAGGACATGCAGCGCATGTTCGAGCTGTTCCCGCGCCTGAAGGAGCGGCGCAACCAGCGCGC CATGACCATGTCCGGCGGCGAGCAGCAGATGCTCGCCATCGCCCGCGCGCTGATGAGCCGGCCGAAGTTGCTGTTGCTCGACGAGCCCTCCCTGGGCCTG
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Amino Acid Sequence |
>amino acid ABC transporter ATP-binding protein
MSDKILSVEHLMMHFGGIKALNDVNLDVERGSITALIGPNGAGKTTVFNCLTGFYKATGGNILLNTQGRTTDVIQVLGEPFQLDDFVKPPQLGSRLYYKM FGGTHLVNRAGLARTFQNIRLFKDMSVVENLLVAQHMFVNRNLLAGILNTPGYRRAESEALDHAFYWLEVVDLVDCANRLAGEMSYGQQRRLEIARAMCT RPELICLDEPAAGLNPAETHALSNIVRYLRDHHGITVLLIEHDMGMVMNISDHIIVLDHGDVIARGNPEQIRHDEKVIAAYLGADEEELS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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