Pseudomonas aeruginosa AZPAE14877, NR93_RS20965

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14877 AZPAE14877_contig_25, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCCGCCAGCATCACCTTCTTCATCCTCACCGTGCGTCGCCGCTGGCTGCTCCAGGAACTGCGCGCCGTCGAACGTGCGCGGGAGGCCGGCTGATGCGCT TCCTCGAACACGACGAGGCGGACGACCCGATCCTCTCGATGGTCAACCTGATCGACCTGTTCCTGGTGGTGATCGGCATCCTCCTGATCGTCATCGTGCA GAACCCGCTCAACCCATTCAGCCAGGACAAGGTGGTGGTGGTCGAGAACCCCGGCGAGGCGGACATGCGCATGCTGGTCAAGGACGGCAAGGAGCTGAAG CGCTACCAGGCCAGCGGCGAGATCGGCGAAGGGCAGGGCAGCCGCGCCGGAGTGACCTACCGCCTGGCCGACGGACGGATGATCTACGTGCCGGAGAGCG GCGGGGAGGCCGGCAAGTAGCGACGCGTACGGCGGAGAGCTGGGACTTTTGCCCGGAGTTCCCGGATAATGGCCGGTTTCCGTTTCTCTTGGTGCTCGCC
DNA Sequence for Gene
>NR93_RS20965
GTGGAAGTAAAGGTCAATTTTCTCGATAACCTTCGACTGGAAGCCAGGTTCGATGATTTCACGGTGATCGCCGACCAGCCGATCCGCTACAAGGGCGACG GCTCCGCGCCGGGGCCGTTCGACTACTTCCTGGCGTCGTCGGCGCTGTGTGCCGCCTACTTCGTCAAGCTGTACTGCCAGACGCGCAACATCCCCACCGA CAACATACGCCTGTCGCAGAACAACATCGTCGACCCGGAGAACCGCTACCGGCAGATCTTCAAGATCCAGGTGGAACTGCCGGCCGACATCTCGGAGAAG GACCGCCAGGGCATCCTCCGCTCCATCGACCGTTGCACGGTGAAGAAGGTGGTGCAGACCGGACCCGAGTTCGTCATCGAGGAGGTCGACAACCTCGATG CCGACGCCCAGGCGCTGCTGATGCCCGGCACCGATGCCGCCGGCTGCACGCGCATCCCGGGCAAGGACCTGCCGCTGGAGCAGACCATCGCCAACCTGTC GGCCATCCTCGCCGGCCTCGGCATGAAGATCGAGATCGCCTCCTGGCGCAACATCGTGCCCAACGTCTGGTCGCTGCACATCCGCGATGCGCAGTCGCCG ATGTGCTTCACCAACGGCAAGGGCGCGAGCAAGGAAAGCGCGCTGGCCTCGGCGCTGGGCGAATTCATCGAGCGGCTAAACTGCAACTTCTTCTACAACG ACCAGTACTGGGGAGAAGAGATCGCCAATGCGGCGTTCGTCCATTACCCGGACGAACGCTGGTTCAAGCCCGGCCGCGACGATGCGCTGCCGCTGGGACT GCTCGACGGCCATTGCCTGGCGATCTACGACCCCGACGGCGAGCTGCGCGGCTCGCACCTGTACGACACCAACTCGGGCAACGTGCAGCGCGGTATCTGC GCCTTGCCCTTCGTGCGCCAGTCCGACGGCCAGGTGGTGTATTTCCCCTCCAACCTGATCGAGAACCTCTACCTCAGCAACGGCATGAGCGCCGGCAATA CCCTGGCCGAGGCGCAGGTGCAGTGCCTGTCGGAGATCTTCGAGCGCGCGGTCAAGCGGCAAATCCTCGAAGGCGAGCTGGCGCTGCCGGACGTGCCGCC GGAGGTGCTGGCCAAGTACCCGGGCATCCTCGCCGGGATCCGCGGCCTGGAAGAGCAGGGCTTCCCGGTACTGGTCAAGGACGCCTCGCTGGGCGGCGAA TTCCCGGTGATGTGCGTGACCCTGATGAATCCGCGCACCGGCGGCGTGTTCGCTTCCTTCGGCGCCCACCCGAGCTTCGAGGTGGCCCTGGAGCGCAGCC TGACCGAACTGCTCCAGGGGCGCAGCTTCGAAGGCCTGAACGACCTGCCCCAGCCGACCTTCGAAAGCCATGCGCTGACCGAGCCGAACAACTTCGTCGA GCATTTCATCGATTCCAGCGGCGTGGTGTCCTGGCGCTTCTTCAGCGCCAAGGCCGATTTCCCGTTCGTCGAGTGGGACTTCACCCGGCAGGGCGAGGCT GCCAACGCCGAGGAAGCCGCGACCCTGTTCGGCATCCTCGAAGCCATGGGCAAGCAGGTCTACATGGCGGTGTACGAGCACCTCGGCGCTACGGCCTGCC GGATCCTGGTGCCGGGCTACTCGGAAATCTATCCGGTGGAAGACCTGATCTGGGACAACACCAACAAGGCCCTGGCGTTCCGCGAGGACATCCTCAACCT GCACCGCCTCGACGACGCCGCGCTCGGGGCGTTGCTGGAGCGCCTGGAAGACTGCGAGGTGGACGACTACACCGACATCACCACGCTGATCGGCGTCGAG TTCGACGACAACACGGTCTGGGGCCAACTGACCATCCTCGAGCTGAAAGTGCTCATCGGCCTCGCCCTGAAGCGCTTCGAAGACGCCAAGGAAGGCGTGG AGGCGTTCCTCCAGTACAACGACAACAGCGTCGAGCGCGGCCTGTTCTACCAGGCGCTGAACGTGGTGCTGGAGGTCATCCTCGACGACGAGCTGGAGAT CGCCGACTACGAGGCCAATTTCCGCCGCATGTTCGGCGACGCGCGGATGGATGCCGCGCTGGGCTCGGTGGACGGCAGCGTGCGCTTCTTCGGCCTGACG CCGACCAGCATGAAGCTGGAAGGGCTCGACCGGCACCTGCGGCTGATCGACAGCTACAAGAAGCTGCACGCGGCGCGAGCCAGGATGCAGCCCGTGGTCG ACGGCGAGGCCGGCGCTGCCGCGGCTGGCGGTCTCAAGCCTCGGCGCATGGCGATCCGCAAGCGCAAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGGGCGCCGAGGTCAGGGCGCGAGGATGATCATGAGGGAAACTTGATTTCATCACGAAGAAATTGAGTTTGTCTCATGGCATGAGCCTCACGAGAATC CCTCCATCGACCTTTCGACTGGAGGAACACCCATGGCCCTGGCCCACACTCTCGGCTTCCCACGCATCGGACGCGATCGCGAACTGAAAAAAGCCCAGGA AGCGTTCTGGAAGGGCGAGCTGGACGAGGCCGGCCTGCGGGCCGTCGGTCGGCAGCTGCGCGCTGCCCACTGGCAGGTACAGAAGGATGCCGGCATCCAG TTGCTGCCGGTCGGCGATTTCGCCTGGTATGACCAGGTGCTGACCCATTCGCTGACCTTCGGCGTGATCCCCGAGCGCTTCCGGGCGCACGGCGAGGCCG GGCCGACCCTGCATACCCTGTTCGGCATGGCCCGTGGCGTCAGCGACGACAGTTGTTGCGGCGGTGCCCATGCCCAGGAAATGACCAAGTGGTTCGACAC
Amino Acid Sequence
>protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
MEVKVNFLDNLRLEARFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQTRNIPTDNIRLSQNNIVDPENRYRQIFKIQVELPADISEK DRQGILRSIDRCTVKKVVQTGPEFVIEEVDNLDADAQALLMPGTDAAGCTRIPGKDLPLEQTIANLSAILAGLGMKIEIASWRNIVPNVWSLHIRDAQSP MCFTNGKGASKESALASALGEFIERLNCNFFYNDQYWGEEIANAAFVHYPDERWFKPGRDDALPLGLLDGHCLAIYDPDGELRGSHLYDTNSGNVQRGIC ALPFVRQSDGQVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKRQILEGELALPDVPPEVLAKYPGILAGIRGLEEQGFPVLVKDASLGGE FPVMCVTLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFESHALTEPNNFVEHFIDSSGVVSWRFFSAKADFPFVEWDFTRQGEA ANAEEAATLFGILEAMGKQVYMAVYEHLGATACRILVPGYSEIYPVEDLIWDNTNKALAFREDILNLHRLDDAALGALLERLEDCEVDDYTDITTLIGVE FDDNTVWGQLTILELKVLIGLALKRFEDAKEGVEAFLQYNDNSVERGLFYQALNVVLEVILDDELEIADYEANFRRMFGDARMDAALGSVDGSVRFFGLT PTSMKLEGLDRHLRLIDSYKKLHAARARMQPVVDGEAGAAAAGGLKPRRMAIRKRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site