Pseudomonas aeruginosa AZPAE14877, NR93_RS19730
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14877 AZPAE14877_contig_21, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGTGACGCGGGCGAACAGCTCGGCATAGCTGATCCGCAACGGTTCTTCGGCGGCGCTGCCATGCAGCAGGCAGCTCAGGGCGATACGCTGGCCGTGGCG CTGGGCCGAGCGTTGCAACAGTTCGTAGGTGCTGGACGGCAGGTCGCGCTGTTCCAGCGGCACGCGTTCCAGGGCTTCGATATCGCTCAGCCCGACGATC GATGGGGACGGATTCATGGTTTTCTTGTTCTTCCGTTGGTGAGTGGGTGGACACTCGCCGGATCGCTCCGGCACCGTCCCGAAGATGCCACCCCCGTCGT CGCCCTACCGTTGTCTTTTTGTAGCGCGCCGCCGGTCGCGCGCACGAGTCCTCCCGAAGGCTGCCCCGGGCGCTTCGCGCAGCCCCCTCCAGGCCCCGTC CGGCCAGGGCTGGAGGGCGCCGGCCAAGCATGGATTTCTCCCCGCTGGCAACATGCTTTACACTGGCGCCCGTTCATTCCTTAACCACTACGAGATCGCC
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| DNA Sequence for Gene |
>NR93_RS19730
GTGCTCAAAGCACTCAAGAAAATCTTCGGCAAGGCCGACGGAACCCAGCCGCAGAGCGGTTCCTCCCCGGTCCCGCAAGGCCCTGCCGGCGCTACCGCGA AAGGTACCGCCCCCACCGGCGAAAAGCCGACCGAGAAACGCCCACGCAAACCGCGCCCCCCGCGCGCCGACAACGAGTCCGGCGCCCCGCGCGCCGCTGA AAAGGCCGAGAAAGGCGAAAAGCCCGCCAAACCCGCCGGCAAAGAAGGCCGGGACGCCAAGCCGCGCAGCGACAAGCCGCGCCGCGAACGCAAGCCGAAG CCGGTGGACAACTGGAAGCTGGAAGACTTCGTGGTCGAACCGCAGGAAGGCAAGACCCGCTTCCACGACTTCAACCTCGCCCCGAGCCTGATGCACGCCA TCCATGACCTCGGCTTCCCCTACTGCACCCCGATCCAGGCGCAGGTACTGGGCTTCACCCTGCGCGGCCAGGACGCTATCGGCCGCGCCCAGACCGGCAC CGGCAAGACCGCCGCGTTCCTCATCTCGATCATCACCCAGTTGCTGCAGACCCCGCCGCCGAAAGAGCGCTACATGGGCGAGCCGCGCGCGCTGATCATC GCCCCGACCCGCGAACTGGTGGTACAGATCGCCAAGGACGCCGCGGCGCTGACCAAGTACACCGGGCTGAACGTGATGACCTTCGTCGGCGGCATGGACT TCGACAAGCAACTCAAGCAGCTGGAAGCGCGCTTCTGCGACATCCTGGTAGCCACCCCAGGCCGTCTGCTGGACTTCAACCAGCGCGGCGAGGTGCACCT GGACATGGTCGAGGTGATGGTCCTCGACGAAGCCGACCGCATGCTCGACATGGGCTTCATCCCGCAGGTCCGGCAGATCATCCGGCAGACCCCGCACAAG GGCGAACGCCAGACCCTGCTGTTCTCGGCGACCTTCACCGACGACGTGATGAACCTCGCCAAGCAGTGGACCGTCGATCCGGCGATCGTCGAGATCGAGC CGGAGAACGTCGCCAGCGACACCGTCGAGCAGCATGTCTACGCCGTGGCCGGCAGCGACAAGTACAAGCTGCTGTACAACCTGGTGGCACAGAACAACTG GGAACGGGTGATGGTCTTCGCCAACCGCAAGGACGAAGTCCGCCGCATCGAGGAACGCCTGACCAAGGACGGCATCAGCGCCGCCCAGATGTCCGGCGAC GTGCCGCAGCACAAGCGCATCCGCACCCTGGAAGGCTTCCGCGAAGGCAAGATCCGCGTCCTGGTGGCAACCGACGTGGCCGGCCGCGGCATCCACATCG ACGGCATCAGCCATGTGATCAACTTCACCCTGCCGGAGGACCCGGACGACTACGTGCACCGTATCGGTCGTACCGGCCGCGCCGGCGCCTCGGGCACCTC GATCAGCTTCGCCGGCGAGGACGATGCCTTCGCCCTGCCGCCGATCGAAGAACTGCTGGGCCGCAAGATCACCTGCGAGATGCCGCCGGCCGAACTGCTC AAGCCGGTACCGCGTAAGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCAGGCGTGGAGAAAAAAGGCGAAGCCATCCGGCTTCGCCTTTTTCGTTTCTGCGACACGCAGGTGCCGCCGTCGGTCATCGAGGCGGGTCGGCGCTT GCCCGGCAATACCTTAAAGTCCAGAATGGACAAATTGTTTACATCCATTCCGGAGATCGCATGAGCGCCGCCACTCCCCTGATCGTCCAGCAGGCCGAAG CCGAGCAACTGCTCGCCCGTATCGACGTCCTCCAGGCCATGCGCCAGCTGTTCCTCGACCTGGCCGCCGGCCAGGCGCTCCAGCCGGCCCAGCAACTGGT GGAGTTCCCCGCCGGTCGCGGCGACTTCATCAACTACCTCGGCGTGCTCGCCCAGGAACAGGTCTACGGAGTCAAGACTTCACCCTACATCGTTCGCGAA CAGGGCCCGTTGGTCACCGCCTGGACCCTGCTGATGTCGATGCAGACCGGCCAGCCCTTGCTGCTCTGCGATGCCGCCCGGCTGACCACCGCGCGCACCG
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| Amino Acid Sequence |
>RNA helicase
MLKALKKIFGKADGTQPQSGSSPVPQGPAGATAKGTAPTGEKPTEKRPRKPRPPRADNESGAPRAAEKAEKGEKPAKPAGKEGRDAKPRSDKPRRERKPK PVDNWKLEDFVVEPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALII APTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHK GERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGD VPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALPPIEELLGRKITCEMPPAELL KPVPRKH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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