Pseudomonas aeruginosa AZPAE14877, NR93_RS19475 (hscB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14877 AZPAE14877_contig_21, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGACGAGGCGGAAACCATCAAGAACACCACCATCGCCGAAGAGCTGGCCCTGCCGCCGGTGAAGATCCACTGCTCCGTTCTCGCCGAAGACGCCATCAAG GCCGCCGTTCGCGACTACAAGCAGAAGAAGGGTTTGCTCTAAGCCGCTCGTGACGAGTAAGGAGTTGCAATGGCCATCAGCATGACCGAAGCCGCCGCCA AACACGTGCAGCGCTCCCTCGAGGGGCGCGGCAAGGGCGAGGGTATCCGTCTTGGCGTGCGCACCACTGGCTGTTCCGGGCTTGCCTATGTCCTCGAATT CGTCGATGAACTGGCGGCCGAGGACCTGGTCTTCGAGAGCCATGGCGTGAAGGTCATCATCGACCCGAAAAGCCTGGTCTATCTCGATGGCACCGAGCTG GACTTCACTCGCGAAGGGCTCAACGAAGGCTTCAAGTTCAACAATCCCAACGTTCGTGGCGAATGCGGCTGCGGCGAAAGCTTCAACGTCTGAGGCCGGC
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| DNA Sequence for Gene |
>NR93_RS19475
|hscB
GTGGGTAAACCCTGTCATTTCGCCCAGTTCGACCTGCAACCGGCTTTCCTGGTCGATCTCGACGAGCTCGGCCAGCGCTATCGCGAGTTGGTGCGCAGCG TCCATCCCGACCGTTTCGCCGACGCTCCCGAGCGCGAGCAGCGTCTCGCCCTGGAACGCGCGGCGCAACTGAACGAGGCCTACCAGACCCTGAAGAGCGC TCCGCGCCGGGCCCTGTACCTGTTGACCCTGAGTGGTCACGAGTTGCCCTTGGAGGCTACGGTGCAGGATCCGGAGTTTCTCCTGCAGCAGATGCAGCTG CGCGAGGAACTGGAGGAATTGCAGGACAGCGCCGACCTGGCCGGCGTGGCGACCTTCAAGCGTCGGCTCAAGGCCGCCCAGGCCGAGCTGGAGCGTGAGT TCGCCGCGTGCTGGGACGATGCGCAGCGCCGCGAAGAGGCCGAACGCCTGGTCCGTCGCATGCAGTTCCTCGACAAGCTCGCGCAGGAAGTGCGCCAGCT GGAAGAGCGACTCGACGATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCCTGCGGCCCCCGGGCCGCACCCCATAGTTAAGACAGAGCATGGCCCTACTGCAGATCGCCGAGCCCGGTCAGAGTCCCAAGCCCCATGAGCGTCGCC TGGCGGTTGGGATCGACCTGGGTACCACCAATTCGCTGGTCGCCGCGGTGCGTAGCGGCGTCGCCGAGCCCTTGCCGGATGCGCAGGGGCGCCTGATCCT GCCTTCCGCGGTGCGTTATCACGCCGAGCGGGCGGAAGTGGGCGAGAGCGCCCGCGCGGCCGCCGCGGAGGATCCCTTCAATACCGTCATTTCGGTCAAG CGCCTGATGGGGCGCGGCCTGGAGGACGTCAAGCAACTGGGCGAGCAATTGCCCTACCGCTTCCGCCAGGGCGAGTCGCACATGCCCTTCATCGAGACCG TACAGGGGTTGAAGAGTCCTGTGGAGGTCTCGGCGGACATCCTGCGTGAGCTGCGCCAGCGCGCCGAAACCACCCTCGGTGGCGAGCTGGTGGGTGCGGT
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| Amino Acid Sequence |
>molecular chaperone HscB
MGKPCHFAQFDLQPAFLVDLDELGQRYRELVRSVHPDRFADAPEREQRLALERAAQLNEAYQTLKSAPRRALYLLTLSGHELPLEATVQDPEFLLQQMQL REELEELQDSADLAGVATFKRRLKAAQAELEREFAACWDDAQRREEAERLVRRMQFLDKLAQEVRQLEERLDD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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