Pseudomonas aeruginosa AZPAE14877, NR93_RS15750
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14877 AZPAE14877_contig_15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTTCCGCTGGGGATGGAAAGGGCATCATGGCTGAGGTGGCTTTATTCGTCGAACGATGGCTGGCCCTGCCGGTATATCGGCCAGGACTTCAAGCGTTGC GGAAACGGCCTGACCAGCTGCAGCGGCTTGCAATCAAAAACGCTGGGCTCGCAATCAGCGTGGCTTTGTCCGGAAGCTCGCGAAGGGGCGGCATGGATGA ATTTTGAAAGTGGGAGTTCGTTAATGGATTGAAGGGTATGCGGCTTCCGGCGCGGCCGAGGTGGATGAGGTTTGCGTCCAGAAAATGACCGTTTCATGGA CGCATACACGAATCTACAGCGCAAAAGGGGCAATTCTGGAGAAGGGAATCAATGATGCCTGTATGGCAGTGGGATGGTGTATTGAAGTTGATTGGCGTGC GTGCCCGGTGTGTTGACGTTGATTACGGAATACTTCTTCCATCTAAGGCTTACTCTAGAAATAATCAACTTGCCCAGTGCTCATCCTGAGGAGTGAGAAT
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| DNA Sequence for Gene |
>NR93_RS15750
ATGAGCGATGATTCACCTATTATTGTTTACGCAAACAGTCCAGCGGAAGTTATTCTAAACCCGACTCGCGACAGGAATGACATATTAAACAATTACCCGG CCGGGAATCCCTTTATTGGCTTAACGTATGCCATTGAAAAAGATTTCAAAGAGAGGAAAAAGAACCTGGAAGCAGGGGTGCAGTCAGAACTGGATGCGAT AGACGCAAAATATCCATCATTACCGAAAGGCTTTACACCGGAGCAATGGTTGGAGAGGGCTACTGCCGTTGTCACCGAGTTGCTCAATCAAAAGCGGCCG AAGCTAGATTATGAGCTGGGTATAGTCAAGAATTTGGCTAGTTTTGATAAGCTGCAAGCAAGCTACAACGCAATCATCCTGAATGATCAGATCAATAGTC TTCAAGAGCGCTTGAACAAGCTCAATGCTGAAACCGACCGCCGCCGGGCGGAGGCAGAAGCCCAGCGTCAGGCAGAAGCGGACGCCAAACGCAAAGCGGA AGAAGCGGCACGCCTGGAAGCCCAGCAGGTCACTCAACAGCTCGGTGCCGACTTCAACGCGATCACCGCTCCGACCGCCACCAAGGTCCAGCAACGTGTG AAAGCAGTGGATGCTAGTCTGTCTCAGGTTTCCACCCAGGTCAGTGGTGCAGTCGCCTCGGCAACCCAGGCGGTGCAGGTCAAGACAGCGCAAGCCCAGC AACAAGCCAACAGCCAGATTTCGTCCAGCCAGAACCTGATCAGCGCGGCATTTCGGAATCAGATTGCCTTGGCAGCACAGGCCAGTGGAGAAGCCCAGGT CACGGCTTTCAACACCAAAGTCAAGCAGATCGTCAACGAAGCCACGGCGTTTTCGACAGCACGAAAACAAGCGCTGGCTCAGTTTGCTGCCAATGCGGCC GCCGAGGTCGAAACCGAGGTCAACAGGCTAACCGCCCAGGTCAAGGCCAGCCCCACCAAGGCGGCTTCGCAAGCTGCACAAGCAACCCTTCGACAATTCA CTGAAAGCACCTATGCCAAGGTGAACACCTTTGCCCAGCAGACCGAAGCAGCGCTGCAGGCTAAGGCAAAAGAGGTCTCAGCAGCGGTAGCCGAAGCACA GCGTGCGGCGACCAACGATTTGCAAAAAACAGCCGATGTAGTACCAGGTCAGATCATCCAGGCTGCGAACACCTTGGCGATGCCGGCCACCTCTGCGCCG CTGGTTTCGGTGGCCGGGTTTGGTAGTGCGGCAGTGGAGACGGCTCGCCTGGCGGCTTCCCTAACGAATGCTGTCAATCGCTTGATTCAGATTGCTGGTA GTGGACCTGGCGCATACGTGGCCACCTTCGCGGTGCTGTCGCTGTATTCCGACCAGGCTGGTAAAGACAGTGACAAGGTTCCTGCCGGCGTTCGCAATGC ATTGGCACTGGAGGCGTCCGCTCTGGGTCTTCCTGGCACGGCTGATTTGCAAAGCGCCGCCAAGGCAGGTGGCACGGTTGATATGCCGGTACGACTCACG AGTGCTGCACAAGAGAGCCCGAGTGGTAAATCGCAGATTGCCGCGGTGCTGACCAACGGGGCAACTGTCCCCAAGGGCGTGCCTGTTCGCGCCGCGACCC TCAATGCTGCGACGGGCCGGTATGAGGTGTCGGTTCCCGCAAAGCCCACCGTACCGAATACACCACCGCTGATCTTGACCTGGACCCCTGCCACCCCTCC AGGAAGCCAGAATCCCTCAAGCACCACTCCGGTCGTACCGCAGCCGGTTCCGGTGTATGAGGGAGCAACGATCACCCCAGTACAGGCCGAGCCGGAGTCC TACCCGGGAGTGCCTTTAGACCTGGACGATCTGATCGTGATTTTCCCGGCGGGCTCGGACGTTCCTCCGCTCTATCTGGTCTTTTCCAAGCCGCCGGTTA AGCTACTGGAGGTGGACATCTATGGTAACTTTGCGGGACGACCTCGTGATGGAAACCATCTTGACCATATGCCCTCACAGGGCGCGCTTGCCGAATCGTT GCTCTCAAAAAATCCTGGGCTCACTTACGATAATATTCGAGGGTACCTGAAAAATGGGGCCAGCGTTGCAATTCCTGCGCGCATACATCAGAAATATAGT GAAACATACGGCGGACGCAACACGAAGGAACGGCAAAGAAAAGACGCCTCTGACTTGCGAGCCGCAGTAGATAGTAATTTCGATGCAATCAAGGGAGCCC TGTTGGAACAGGGGGTTTCTGAGAAAGAACTAGAGATAGCTCGTGCATCCATGCACAGAATCAATGTAGAACAAGGGTGGTACGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCAACGTCAATTCTTAAGGTTATCGAAGGACTAGGAAAAAGTTATGAGGAACTAGTCACGAAAAGTATAATCCCTAAAGGTATTTTAGAAGAGCCGTA TGATGGCTGCGACCATTTGACAAATAGCCCAGAGGAGGGCATCGAGCTGGCATTTGAGAAAGATACTAATCGCCTAGATAAAATTAGTTTTCTACTGATC AGGACTGTTGGGGAACTCCGTCCATATGCCGGCGATCTGCCGCAACCTTTCTCAAAAGAAATGGATAAAGCAGGTGTGCGTTCTATTCTCGGAGTACCCG AGGATACAAAAGAGCCTTTTAAGATGCCCGTGATCGGTTTGGTAGGAGGGTGGGACTATTATGCTTACCCAGAGCGGCCTGAAATTAAAGTCTTTTTCAG CTATACCGCTGAAATGAAAGTTGATACGCTTTCGTTTATCTTAAAAGAATCTGTGAATACATAACTTGGCTCCGGCGTTTTGATGAATATAGGCAGAGGT
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| Amino Acid Sequence |
>pyocin killing protein
MSDDSPIIVYANSPAEVILNPTRDRNDILNNYPAGNPFIGLTYAIEKDFKERKKNLEAGVQSELDAIDAKYPSLPKGFTPEQWLERATAVVTELLNQKRP KLDYELGIVKNLASFDKLQASYNAIILNDQINSLQERLNKLNAETDRRRAEAEAQRQAEADAKRKAEEAARLEAQQVTQQLGADFNAITAPTATKVQQRV KAVDASLSQVSTQVSGAVASATQAVQVKTAQAQQQANSQISSSQNLISAAFRNQIALAAQASGEAQVTAFNTKVKQIVNEATAFSTARKQALAQFAANAA AEVETEVNRLTAQVKASPTKAASQAAQATLRQFTESTYAKVNTFAQQTEAALQAKAKEVSAAVAEAQRAATNDLQKTADVVPGQIIQAANTLAMPATSAP LVSVAGFGSAAVETARLAASLTNAVNRLIQIAGSGPGAYVATFAVLSLYSDQAGKDSDKVPAGVRNALALEASALGLPGTADLQSAAKAGGTVDMPVRLT SAAQESPSGKSQIAAVLTNGATVPKGVPVRAATLNAATGRYEVSVPAKPTVPNTPPLILTWTPATPPGSQNPSSTTPVVPQPVPVYEGATITPVQAEPES YPGVPLDLDDLIVIFPAGSDVPPLYLVFSKPPVKLLEVDIYGNFAGRPRDGNHLDHMPSQGALAESLLSKNPGLTYDNIRGYLKNGASVAIPARIHQKYS ETYGGRNTKERQRKDASDLRAAVDSNFDAIKGALLEQGVSEKELEIARASMHRINVEQGWYE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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